Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.71■■□□□ 1.39
RPGRQ92834 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.71■■□□□ 1.39
RPGRQ92834 AL691432.3-201ENST00000621860 400 ntBASIC23.71■■□□□ 1.39
RPGRQ92834 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.39
RPGRQ92834 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RPGRQ92834 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RPGRQ92834 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.7■■□□□ 1.39
RPGRQ92834 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RPGRQ92834 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RPGRQ92834 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.7■■□□□ 1.38
RPGRQ92834 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 ATP5G2P1-201ENST00000433580 426 ntBASIC23.7■■□□□ 1.38
RPGRQ92834 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RPGRQ92834 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.7■■□□□ 1.38
RPGRQ92834 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPGRQ92834 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.7■■□□□ 1.38
RPGRQ92834 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.7■■□□□ 1.38
RPGRQ92834 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
RPGRQ92834 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RPGRQ92834 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.69■■□□□ 1.38
RPGRQ92834 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.69■■□□□ 1.38
RPGRQ92834 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RPGRQ92834 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 AL391422.3-201ENST00000603791 2761 ntBASIC23.69■■□□□ 1.38
RPGRQ92834 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RPGRQ92834 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.69■■□□□ 1.38
RPGRQ92834 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.69■■□□□ 1.38
RPGRQ92834 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RPGRQ92834 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.69■■□□□ 1.38
RPGRQ92834 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.68■■□□□ 1.38
RPGRQ92834 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.68■■□□□ 1.38
RPGRQ92834 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 SPDYE13P-201ENST00000445314 798 ntBASIC23.68■■□□□ 1.38
RPGRQ92834 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.68■■□□□ 1.38
RPGRQ92834 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.68■■□□□ 1.38
RPGRQ92834 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RPGRQ92834 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
RPGRQ92834 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RPGRQ92834 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.67■■□□□ 1.38
RPGRQ92834 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RPGRQ92834 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 HBZP1-201ENST00000354915 429 ntBASIC23.67■■□□□ 1.38
RPGRQ92834 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RPGRQ92834 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.67■■□□□ 1.38
RPGRQ92834 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
RPGRQ92834 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPGRQ92834 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.66■■□□□ 1.38
RPGRQ92834 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RPGRQ92834 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.66■■□□□ 1.38
RPGRQ92834 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 AC104417.2-201ENST00000562989 1793 ntBASIC23.66■■□□□ 1.38
RPGRQ92834 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.66■■□□□ 1.38
RPGRQ92834 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RPGRQ92834 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.66■■□□□ 1.38
RPGRQ92834 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.66■■□□□ 1.38
RPGRQ92834 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.66■■□□□ 1.38
RPGRQ92834 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.66■■□□□ 1.38
RPGRQ92834 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms