Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.77■■□□□ 1.08
USP6NLQ92738 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.77■■□□□ 1.08
USP6NLQ92738 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.77■■□□□ 1.08
USP6NLQ92738 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.77■■□□□ 1.08
USP6NLQ92738 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.77■■□□□ 1.08
USP6NLQ92738 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.77■■□□□ 1.08
USP6NLQ92738 AC092119.3-201ENST00000612618 583 ntBASIC21.77■■□□□ 1.08
USP6NLQ92738 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.77■■□□□ 1.08
USP6NLQ92738 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.77■■□□□ 1.08
USP6NLQ92738 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP6NLQ92738 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
USP6NLQ92738 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
USP6NLQ92738 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.76■■□□□ 1.07
USP6NLQ92738 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
USP6NLQ92738 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.76■■□□□ 1.07
USP6NLQ92738 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.76■■□□□ 1.07
USP6NLQ92738 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.76■■□□□ 1.07
USP6NLQ92738 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.76■■□□□ 1.07
USP6NLQ92738 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.76■■□□□ 1.07
USP6NLQ92738 AC009237.14-201ENST00000609975 1594 ntBASIC21.76■■□□□ 1.07
USP6NLQ92738 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.76■■□□□ 1.07
USP6NLQ92738 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.76■■□□□ 1.07
USP6NLQ92738 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
USP6NLQ92738 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6NLQ92738 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.76■■□□□ 1.07
USP6NLQ92738 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.75■■□□□ 1.07
USP6NLQ92738 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.75■■□□□ 1.07
USP6NLQ92738 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.75■■□□□ 1.07
USP6NLQ92738 AC246785.2-201ENST00000432512 513 ntBASIC21.75■■□□□ 1.07
USP6NLQ92738 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.75■■□□□ 1.07
USP6NLQ92738 AC092597.1-201ENST00000487352 616 ntBASIC21.75■■□□□ 1.07
USP6NLQ92738 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.75■■□□□ 1.07
USP6NLQ92738 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.75■■□□□ 1.07
USP6NLQ92738 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
USP6NLQ92738 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
USP6NLQ92738 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.75■■□□□ 1.07
USP6NLQ92738 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
USP6NLQ92738 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6NLQ92738 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.74■■□□□ 1.07
USP6NLQ92738 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
USP6NLQ92738 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
USP6NLQ92738 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.74■■□□□ 1.07
USP6NLQ92738 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
USP6NLQ92738 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.74■■□□□ 1.07
USP6NLQ92738 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
USP6NLQ92738 RASA4DP-201ENST00000460726 1199 ntBASIC21.74■■□□□ 1.07
USP6NLQ92738 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
USP6NLQ92738 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.74■■□□□ 1.07
USP6NLQ92738 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP6NLQ92738 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
USP6NLQ92738 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
USP6NLQ92738 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.73■■□□□ 1.07
USP6NLQ92738 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.73■■□□□ 1.07
USP6NLQ92738 AL645929.1-201ENST00000420084 975 ntBASIC21.73■■□□□ 1.07
USP6NLQ92738 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms