Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 AP000523.1-201ENST00000398242 1049 ntBASIC19.28■□□□□ 0.68
HMGB4Q8WW32 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.28■□□□□ 0.68
HMGB4Q8WW32 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.28■□□□□ 0.68
HMGB4Q8WW32 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGB4Q8WW32 AC005332.1-201ENST00000577698 1310 ntBASIC19.27■□□□□ 0.68
HMGB4Q8WW32 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 AL121894.2-201ENST00000602977 491 ntBASIC19.27■□□□□ 0.68
HMGB4Q8WW32 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGB4Q8WW32 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGB4Q8WW32 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HMGB4Q8WW32 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGB4Q8WW32 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.27■□□□□ 0.67
HMGB4Q8WW32 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGB4Q8WW32 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGB4Q8WW32 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 KRT18P48-201ENST00000434763 852 ntBASIC19.26■□□□□ 0.67
HMGB4Q8WW32 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.26■□□□□ 0.67
HMGB4Q8WW32 AC112907.2-201ENST00000448639 330 ntBASIC19.26■□□□□ 0.67
HMGB4Q8WW32 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 VENTXP5-201ENST00000523979 775 ntBASIC19.26■□□□□ 0.67
HMGB4Q8WW32 KRT126P-201ENST00000549467 1181 ntBASIC19.26■□□□□ 0.67
HMGB4Q8WW32 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGB4Q8WW32 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 AP005212.1-201ENST00000581547 1997 ntBASIC19.25■□□□□ 0.67
HMGB4Q8WW32 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGB4Q8WW32 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms