Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCD2Q8WV60 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 AC017007.3-201ENST00000479865 435 ntBASIC19.46■□□□□ 0.71
PTCD2Q8WV60 RARRES2P10-201ENST00000564312 460 ntBASIC19.46■□□□□ 0.71
PTCD2Q8WV60 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 AL049637.2-201ENST00000641778 930 ntBASIC19.46■□□□□ 0.71
PTCD2Q8WV60 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 HTR7P1-201ENST00000538670 1336 ntBASIC19.46■□□□□ 0.71
PTCD2Q8WV60 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 TEX21P-204ENST00000641479 1693 ntBASIC19.46■□□□□ 0.71
PTCD2Q8WV60 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCD2Q8WV60 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 KRT16P5-201ENST00000455284 522 ntBASIC19.45■□□□□ 0.7
PTCD2Q8WV60 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 AC098799.1-201ENST00000504752 800 ntBASIC19.45■□□□□ 0.7
PTCD2Q8WV60 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 TNXA-203ENST00000507684 2038 ntBASIC19.45■□□□□ 0.7
PTCD2Q8WV60 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCD2Q8WV60 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 TSPY15P-201ENST00000457163 923 ntBASIC19.44■□□□□ 0.7
PTCD2Q8WV60 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCD2Q8WV60 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 AF186192.3-201ENST00000583427 947 ntBASIC19.43■□□□□ 0.7
PTCD2Q8WV60 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 AC087289.5-201ENST00000586076 3175 ntBASIC19.43■□□□□ 0.7
PTCD2Q8WV60 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms