Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 AC134043.2-201ENST00000624206 2238 ntBASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 PTBP1P-201ENST00000554374 1601 ntBASIC19.33■□□□□ 0.68
BCAS4Q8TDM0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 UNC93B8-201ENST00000511903 705 ntBASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 AL356740.2-201ENST00000601559 647 ntBASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCAS4Q8TDM0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 AC007322.3-201ENST00000426526 701 ntBASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 ANO7L1-203ENST00000602586 1720 ntBASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCAS4Q8TDM0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 AL139384.1-201ENST00000612143 3047 ntBASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 IRX1P1-201ENST00000438849 1838 ntBASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 DUX4L19-201ENST00000557448 1267 ntBASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 AC120498.10-201ENST00000621827 505 ntBASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 GNAS-203ENST00000306120 1878 ntBASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCAS4Q8TDM0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms