Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AL031985.4-201ENST00000642138 673 ntBASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 KRT8P9-201ENST00000558927 1449 ntBASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 MIR6786-201ENST00000616843 113 ntBASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 AL445675.2-201ENST00000620291 557 ntBASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDND2Q8NHS1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDND2Q8NHS1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CLDND2Q8NHS1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CLDND2Q8NHS1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDND2Q8NHS1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 AL390955.1-201ENST00000428694 934 ntBASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLDND2Q8NHS1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 RCN1P1-201ENST00000400413 996 ntBASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 LETM1P2-201ENST00000597330 2178 ntBASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 BX119927.1-201ENST00000636596 1552 ntBASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDND2Q8NHS1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms