Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 AL441883.1-201ENST00000566170 1045 ntBASIC23.69■■□□□ 1.38
RTL9Q8NET4 NEK4P2-201ENST00000580004 1012 ntBASIC23.69■■□□□ 1.38
RTL9Q8NET4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTL9Q8NET4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTL9Q8NET4 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.69■■□□□ 1.38
RTL9Q8NET4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTL9Q8NET4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTL9Q8NET4 SDHAP1-207ENST00000440850 2000 ntBASIC23.69■■□□□ 1.38
RTL9Q8NET4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.69■■□□□ 1.38
RTL9Q8NET4 AL157384.1-201ENST00000445995 2473 ntBASIC23.68■■□□□ 1.38
RTL9Q8NET4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 HOMER2P1-201ENST00000455653 964 ntBASIC23.68■■□□□ 1.38
RTL9Q8NET4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL9Q8NET4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL9Q8NET4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.67■■□□□ 1.38
RTL9Q8NET4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.67■■□□□ 1.38
RTL9Q8NET4 AL121894.2-201ENST00000602977 491 ntBASIC23.67■■□□□ 1.38
RTL9Q8NET4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 AL023973.1-201ENST00000624619 620 ntBASIC23.67■■□□□ 1.38
RTL9Q8NET4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RTL9Q8NET4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.67■■□□□ 1.38
RTL9Q8NET4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.67■■□□□ 1.38
RTL9Q8NET4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RTL9Q8NET4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.67■■□□□ 1.38
RTL9Q8NET4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.67■■□□□ 1.38
RTL9Q8NET4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTL9Q8NET4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.66■■□□□ 1.38
RTL9Q8NET4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTL9Q8NET4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 AC009947.2-201ENST00000444014 672 ntBASIC23.65■■□□□ 1.38
RTL9Q8NET4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms