Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 MTDHP1-201ENST00000605323 784 ntBASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 AC069544.1-201ENST00000609399 999 ntBASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.6■□□□□ 0.41
LSMEM1Q8N8F7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 KRT18P6-201ENST00000555540 1265 ntBASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSMEM1Q8N8F7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSMEM1Q8N8F7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LSMEM1Q8N8F7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.58■□□□□ 0.41
LSMEM1Q8N8F7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LSMEM1Q8N8F7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSMEM1Q8N8F7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.58■□□□□ 0.41
LSMEM1Q8N8F7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LSMEM1Q8N8F7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 AC004264.1-201ENST00000608354 794 ntBASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.58■□□□□ 0.4
LSMEM1Q8N8F7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms