Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
ZNF440Q8IYI8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF440Q8IYI8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF440Q8IYI8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF440Q8IYI8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
ZNF440Q8IYI8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF440Q8IYI8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF440Q8IYI8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 HCG11-201ENST00000411553 5696 ntBASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 AP000974.1-201ENST00000623909 2387 ntBASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF440Q8IYI8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 AC120498.9-201ENST00000339021 3867 ntBASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 FP475955.4-201ENST00000623131 1990 ntBASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 AC128676.1-201ENST00000454392 318 ntBASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF440Q8IYI8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 AL161938.1-201ENST00000569833 2180 ntBASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF440Q8IYI8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZNF440Q8IYI8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF440Q8IYI8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF440Q8IYI8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF440Q8IYI8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms