Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 AL512408.1-201ENST00000569378 2000 ntBASIC20.39■□□□□ 0.85
RNF135Q8IUD6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 AP006587.1-201ENST00000534129 1502 ntBASIC20.38■□□□□ 0.85
RNF135Q8IUD6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 MFAP1P1-201ENST00000442257 1255 ntBASIC20.38■□□□□ 0.85
RNF135Q8IUD6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF135Q8IUD6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RNF135Q8IUD6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 AC140113.3-201ENST00000605663 199 ntBASIC20.36■□□□□ 0.85
RNF135Q8IUD6 AC011298.2-201ENST00000617989 482 ntBASIC20.36■□□□□ 0.85
RNF135Q8IUD6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF135Q8IUD6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 RCC2P6-201ENST00000526625 1557 ntBASIC20.35■□□□□ 0.85
RNF135Q8IUD6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 GPALPP1-207ENST00000611650 899 ntBASIC20.35■□□□□ 0.85
RNF135Q8IUD6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF135Q8IUD6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms