Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 AC139887.4-201ENST00000607877 719 ntBASIC21.45■■□□□ 1.02
TRIM50Q86XT4 AC010653.2-201ENST00000623505 997 ntBASIC21.45■■□□□ 1.02
TRIM50Q86XT4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 AL353719.1-201ENST00000566847 864 ntBASIC21.44■■□□□ 1.02
TRIM50Q86XT4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM50Q86XT4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 SDHAP1-207ENST00000440850 2000 ntBASIC21.43■■□□□ 1.02
TRIM50Q86XT4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM50Q86XT4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 ZNF815P-204ENST00000434898 1737 ntBASIC21.42■■□□□ 1.02
TRIM50Q86XT4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 TSPY17P-201ENST00000450329 467 ntBASIC21.42■■□□□ 1.02
TRIM50Q86XT4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 AC022616.7-201ENST00000525383 220 ntBASIC21.42■■□□□ 1.02
TRIM50Q86XT4 AP003041.3-201ENST00000527151 707 ntBASIC21.42■■□□□ 1.02
TRIM50Q86XT4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 AC087388.1-201ENST00000571370 1112 ntBASIC21.42■■□□□ 1.02
TRIM50Q86XT4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
TRIM50Q86XT4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 CA15P1-201ENST00000481698 905 ntBASIC21.41■■□□□ 1.02
TRIM50Q86XT4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM50Q86XT4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms