Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 AL596275.1-201ENST00000423464 877 ntBASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 AC009053.2-201ENST00000563701 2365 ntBASIC19.98■□□□□ 0.79
FOXR1Q6PIV2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 AC090164.3-201ENST00000610780 2143 ntBASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 UNC93B5-201ENST00000530315 699 ntBASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXR1Q6PIV2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 AC243732.1-201ENST00000612648 864 ntBASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 KRT17P1-201ENST00000399211 1546 ntBASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXR1Q6PIV2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
FOXR1Q6PIV2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms