Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC016734.2-201ENST00000624325 1377 ntBASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13DQ5THJ4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 AC006538.3-201ENST00000612495 578 ntBASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 AL162377.1-201ENST00000618844 1793 ntBASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 TPSP2-201ENST00000561760 610 ntBASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13DQ5THJ4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 RASA4DP-201ENST00000460726 1199 ntBASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 AL031008.1-201ENST00000619963 541 ntBASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 MIR3917-201ENST00000580971 93 ntBASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 AC024243.1-201ENST00000609234 778 ntBASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VPS13DQ5THJ4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 AC093525.10-201ENST00000625130 1569 ntBASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 MIR3652-201ENST00000579335 131 ntBASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms