Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNFT1Q5M7Z0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 SDHAP1-207ENST00000440850 2000 ntBASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 AL023973.1-201ENST00000624619 620 ntBASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNFT1Q5M7Z0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 AL031133.1-201ENST00000406807 723 ntBASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 AL441883.1-201ENST00000566170 1045 ntBASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
RNFT1Q5M7Z0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 LINC01238-205ENST00000567549 1107 ntBASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms