Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 AC116351.2-201ENST00000606540 1585 ntBASIC17.16■□□□□ 0.34
CCDC58Q4VC31 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 AC006333.2-201ENST00000607957 2099 ntBASIC17.16■□□□□ 0.34
CCDC58Q4VC31 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 AC068338.2-201ENST00000563278 1430 ntBASIC17.16■□□□□ 0.34
CCDC58Q4VC31 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 NTF6G-201ENST00000591094 616 ntBASIC17.16■□□□□ 0.34
CCDC58Q4VC31 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 AC018553.1-201ENST00000616682 1458 ntBASIC17.16■□□□□ 0.34
CCDC58Q4VC31 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC58Q4VC31 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 AL589743.5-201ENST00000616611 1050 ntBASIC17.15■□□□□ 0.34
CCDC58Q4VC31 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC58Q4VC31 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC58Q4VC31 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 TEX21P-204ENST00000641479 1693 ntBASIC17.14■□□□□ 0.33
CCDC58Q4VC31 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 AC069236.1-201ENST00000604339 616 ntBASIC17.14■□□□□ 0.33
CCDC58Q4VC31 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC58Q4VC31 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC58Q4VC31 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC58Q4VC31 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms