Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC010203.1-204ENST00000548782 407 ntBASIC23.29■■□□□ 1.32
RFX7Q2KHR2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 FAM87A-204ENST00000613235 858 ntBASIC23.29■■□□□ 1.32
RFX7Q2KHR2 AC131212.4-201ENST00000623606 975 ntBASIC23.29■■□□□ 1.32
RFX7Q2KHR2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 AL032819.2-201ENST00000624543 2162 ntBASIC23.29■■□□□ 1.32
RFX7Q2KHR2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 TEX21P-204ENST00000641479 1693 ntBASIC23.29■■□□□ 1.32
RFX7Q2KHR2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 AP000692.2-201ENST00000608391 879 ntBASIC23.28■■□□□ 1.32
RFX7Q2KHR2 AC141586.3-201ENST00000562166 1838 ntBASIC23.28■■□□□ 1.32
RFX7Q2KHR2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 KRT8P41-201ENST00000533985 1514 ntBASIC23.28■■□□□ 1.32
RFX7Q2KHR2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 LINC01465-201ENST00000408887 1940 ntBASIC23.28■■□□□ 1.32
RFX7Q2KHR2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFX7Q2KHR2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 C2orf69P3-201ENST00000565542 1120 ntBASIC23.27■■□□□ 1.32
RFX7Q2KHR2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.27■■□□□ 1.32
RFX7Q2KHR2 INGX-201ENST00000359239 846 ntBASIC23.27■■□□□ 1.31
RFX7Q2KHR2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
RFX7Q2KHR2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.27■■□□□ 1.31
RFX7Q2KHR2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
RFX7Q2KHR2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.27■■□□□ 1.31
RFX7Q2KHR2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.27■■□□□ 1.31
RFX7Q2KHR2 EGLN1P1-201ENST00000531623 762 ntBASIC23.27■■□□□ 1.31
RFX7Q2KHR2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RFX7Q2KHR2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.27■■□□□ 1.31
RFX7Q2KHR2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.26■■□□□ 1.31
RFX7Q2KHR2 AC011298.2-201ENST00000617989 482 ntBASIC23.26■■□□□ 1.31
RFX7Q2KHR2 AC006011.2-201ENST00000621313 1158 ntBASIC23.26■■□□□ 1.31
RFX7Q2KHR2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RFX7Q2KHR2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 TSPY21P-201ENST00000433481 731 ntBASIC23.25■■□□□ 1.31
RFX7Q2KHR2 AC097488.1-201ENST00000507834 756 ntBASIC23.25■■□□□ 1.31
RFX7Q2KHR2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 AC130371.2-201ENST00000619443 611 ntBASIC23.25■■□□□ 1.31
RFX7Q2KHR2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms