Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX4P78413 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
IRX4P78413 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
IRX4P78413 AC005521.1-201ENST00000393351 872 ntBASIC19.96■□□□□ 0.79
IRX4P78413 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.96■□□□□ 0.79
IRX4P78413 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX4P78413 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
IRX4P78413 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX4P78413 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
IRX4P78413 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX4P78413 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX4P78413 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX4P78413 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.96■□□□□ 0.79
IRX4P78413 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.96■□□□□ 0.79
IRX4P78413 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
IRX4P78413 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IRX4P78413 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
IRX4P78413 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.95■□□□□ 0.78
IRX4P78413 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX4P78413 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.95■□□□□ 0.78
IRX4P78413 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IRX4P78413 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX4P78413 KRT8P9-201ENST00000558927 1449 ntBASIC19.95■□□□□ 0.78
IRX4P78413 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.95■□□□□ 0.78
IRX4P78413 AL353807.1-201ENST00000427475 662 ntBASIC19.95■□□□□ 0.78
IRX4P78413 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.95■□□□□ 0.78
IRX4P78413 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.95■□□□□ 0.78
IRX4P78413 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.95■□□□□ 0.78
IRX4P78413 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.95■□□□□ 0.78
IRX4P78413 AL121829.2-201ENST00000620908 328 ntBASIC19.95■□□□□ 0.78
IRX4P78413 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX4P78413 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.95■□□□□ 0.78
IRX4P78413 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX4P78413 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX4P78413 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.95■□□□□ 0.78
IRX4P78413 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
IRX4P78413 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.94■□□□□ 0.78
IRX4P78413 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IRX4P78413 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
IRX4P78413 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IRX4P78413 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IRX4P78413 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.94■□□□□ 0.78
IRX4P78413 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.94■□□□□ 0.78
IRX4P78413 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.94■□□□□ 0.78
IRX4P78413 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.94■□□□□ 0.78
IRX4P78413 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
IRX4P78413 BX119927.1-201ENST00000636596 1552 ntBASIC19.94■□□□□ 0.78
IRX4P78413 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IRX4P78413 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.94■□□□□ 0.78
IRX4P78413 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
IRX4P78413 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IRX4P78413 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
IRX4P78413 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 NBPF21P-201ENST00000425093 1451 ntBASIC19.93■□□□□ 0.78
IRX4P78413 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.93■□□□□ 0.78
IRX4P78413 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
IRX4P78413 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
IRX4P78413 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
IRX4P78413 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.93■□□□□ 0.78
IRX4P78413 RBM17P1-201ENST00000453646 1190 ntBASIC19.93■□□□□ 0.78
IRX4P78413 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.93■□□□□ 0.78
IRX4P78413 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 AC073195.1-201ENST00000607241 877 ntBASIC19.93■□□□□ 0.78
IRX4P78413 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.93■□□□□ 0.78
IRX4P78413 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.93■□□□□ 0.78
IRX4P78413 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IRX4P78413 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
IRX4P78413 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 AC079598.2-202ENST00000546624 1451 ntBASIC19.92■□□□□ 0.78
IRX4P78413 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.92■□□□□ 0.78
IRX4P78413 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.92■□□□□ 0.78
IRX4P78413 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.92■□□□□ 0.78
IRX4P78413 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.92■□□□□ 0.78
IRX4P78413 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.92■□□□□ 0.78
IRX4P78413 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IRX4P78413 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.92■□□□□ 0.78
IRX4P78413 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
IRX4P78413 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.92■□□□□ 0.78
IRX4P78413 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.92■□□□□ 0.78
IRX4P78413 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms