Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RPL39P62891 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.6□□□□□ -0.23
RPL39P62891 AL354751.1-201ENST00000412768 1863 ntBASIC13.6□□□□□ -0.23
RPL39P62891 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.6□□□□□ -0.23
RPL39P62891 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.6□□□□□ -0.23
RPL39P62891 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.6□□□□□ -0.23
RPL39P62891 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 AC010536.3-201ENST00000620306 533 ntBASIC13.6□□□□□ -0.23
RPL39P62891 AC105020.6-201ENST00000621523 1217 ntBASIC13.6□□□□□ -0.23
RPL39P62891 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RPL39P62891 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.59□□□□□ -0.23
RPL39P62891 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RPL39P62891 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 NOC2LP1-202ENST00000452600 2235 ntBASIC13.59□□□□□ -0.23
RPL39P62891 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.59□□□□□ -0.23
RPL39P62891 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.59□□□□□ -0.23
RPL39P62891 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RPL39P62891 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RPL39P62891 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.59□□□□□ -0.23
RPL39P62891 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.59□□□□□ -0.23
RPL39P62891 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RPL39P62891 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
RPL39P62891 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RPL39P62891 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
RPL39P62891 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RPL39P62891 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RPL39P62891 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
RPL39P62891 AC093525.10-201ENST00000625130 1569 ntBASIC13.58□□□□□ -0.23
RPL39P62891 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.58□□□□□ -0.23
RPL39P62891 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RPL39P62891 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.58□□□□□ -0.23
RPL39P62891 AL512353.2-201ENST00000448759 1962 ntBASIC13.58□□□□□ -0.24
RPL39P62891 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RPL39P62891 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL39P62891 YBX1P1-201ENST00000445822 960 ntBASIC13.58□□□□□ -0.24
RPL39P62891 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL39P62891 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.58□□□□□ -0.24
RPL39P62891 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.58□□□□□ -0.24
RPL39P62891 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL39P62891 AC018553.1-201ENST00000616682 1458 ntBASIC13.58□□□□□ -0.24
RPL39P62891 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RPL39P62891 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
RPL39P62891 AC068880.1-201ENST00000507289 2297 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms