Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CKS1BP61024 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CKS1BP61024 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CKS1BP61024 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CKS1BP61024 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS1BP61024 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CKS1BP61024 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 OR6D1P-203ENST00000641209 4860 ntBASIC13.43□□□□□ -0.26
CKS1BP61024 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.43□□□□□ -0.26
CKS1BP61024 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CKS1BP61024 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 AC105265.2-201ENST00000467189 838 ntBASIC13.43□□□□□ -0.26
CKS1BP61024 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.43□□□□□ -0.26
CKS1BP61024 AL136967.2-201ENST00000623968 743 ntBASIC13.43□□□□□ -0.26
CKS1BP61024 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.43□□□□□ -0.26
CKS1BP61024 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CKS1BP61024 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CKS1BP61024 AC084018.2-201ENST00000613093 2607 ntBASIC13.43□□□□□ -0.26
CKS1BP61024 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS1BP61024 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CKS1BP61024 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CKS1BP61024 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS1BP61024 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS1BP61024 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS1BP61024 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS1BP61024 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS1BP61024 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CKS1BP61024 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS1BP61024 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS1BP61024 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 AC007322.3-201ENST00000426526 701 ntBASIC13.42□□□□□ -0.26
CKS1BP61024 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.42□□□□□ -0.26
CKS1BP61024 MIR6084-201ENST00000622012 110 ntBASIC13.42□□□□□ -0.26
CKS1BP61024 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS1BP61024 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CKS1BP61024 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CKS1BP61024 TMEM179-206ENST00000616017 1645 ntBASIC13.42□□□□□ -0.26
CKS1BP61024 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS1BP61024 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CKS1BP61024 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS1BP61024 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS1BP61024 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CKS1BP61024 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS1BP61024 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS1BP61024 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS1BP61024 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS1BP61024 PGM5P4-201ENST00000421970 445 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms