Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRP54P61011 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.95■□□□□ 0.62
SRP54P61011 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRP54P61011 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRP54P61011 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRP54P61011 SLC25A1P2-201ENST00000430693 912 ntBASIC18.95■□□□□ 0.62
SRP54P61011 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.95■□□□□ 0.62
SRP54P61011 CCR12P-201ENST00000446203 998 ntBASIC18.95■□□□□ 0.62
SRP54P61011 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 AC010203.1-204ENST00000548782 407 ntBASIC18.95■□□□□ 0.62
SRP54P61011 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRP54P61011 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRP54P61011 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP54P61011 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.95■□□□□ 0.62
SRP54P61011 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SRP54P61011 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.94■□□□□ 0.62
SRP54P61011 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.94■□□□□ 0.62
SRP54P61011 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SRP54P61011 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.94■□□□□ 0.62
SRP54P61011 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.94■□□□□ 0.62
SRP54P61011 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
SRP54P61011 ATP5G1P1-201ENST00000448724 379 ntBASIC18.94■□□□□ 0.62
SRP54P61011 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.94■□□□□ 0.62
SRP54P61011 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.94■□□□□ 0.62
SRP54P61011 AL049597.2-201ENST00000565575 961 ntBASIC18.94■□□□□ 0.62
SRP54P61011 FAM87A-204ENST00000613235 858 ntBASIC18.94■□□□□ 0.62
SRP54P61011 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SRP54P61011 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.94■□□□□ 0.62
SRP54P61011 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRP54P61011 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SRP54P61011 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.93■□□□□ 0.62
SRP54P61011 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SRP54P61011 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.93■□□□□ 0.62
SRP54P61011 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.93■□□□□ 0.62
SRP54P61011 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SRP54P61011 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.93■□□□□ 0.62
SRP54P61011 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.93■□□□□ 0.62
SRP54P61011 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SRP54P61011 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.93■□□□□ 0.62
SRP54P61011 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SRP54P61011 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRP54P61011 LINC01521-201ENST00000504184 1943 ntBASIC18.92■□□□□ 0.62
SRP54P61011 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.92■□□□□ 0.62
SRP54P61011 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.92■□□□□ 0.62
SRP54P61011 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SRP54P61011 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SRP54P61011 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRP54P61011 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.92■□□□□ 0.62
SRP54P61011 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRP54P61011 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.92■□□□□ 0.62
SRP54P61011 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.92■□□□□ 0.62
SRP54P61011 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.92■□□□□ 0.62
SRP54P61011 CKBP1-201ENST00000565489 1086 ntBASIC18.92■□□□□ 0.62
SRP54P61011 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.92■□□□□ 0.62
SRP54P61011 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRP54P61011 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SRP54P61011 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms