Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.66■□□□□ 0.9
MCCD1P59942 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 FAM197Y1-201ENST00000421178 764 ntBASIC20.66■□□□□ 0.9
MCCD1P59942 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.66■□□□□ 0.9
MCCD1P59942 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.66■□□□□ 0.9
MCCD1P59942 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.66■□□□□ 0.9
MCCD1P59942 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 AC096733.2-201ENST00000609937 1394 ntBASIC20.66■□□□□ 0.9
MCCD1P59942 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.66■□□□□ 0.9
MCCD1P59942 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.66■□□□□ 0.9
MCCD1P59942 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 AC006333.2-201ENST00000607957 2099 ntBASIC20.66■□□□□ 0.9
MCCD1P59942 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
MCCD1P59942 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MCCD1P59942 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.66■□□□□ 0.9
MCCD1P59942 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MCCD1P59942 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.65■□□□□ 0.9
MCCD1P59942 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCCD1P59942 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCCD1P59942 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MCCD1P59942 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCCD1P59942 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.65■□□□□ 0.9
MCCD1P59942 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.65■□□□□ 0.9
MCCD1P59942 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MCCD1P59942 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.65■□□□□ 0.9
MCCD1P59942 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
MCCD1P59942 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.65■□□□□ 0.9
MCCD1P59942 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.65■□□□□ 0.9
MCCD1P59942 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.65■□□□□ 0.9
MCCD1P59942 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.65■□□□□ 0.9
MCCD1P59942 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.65■□□□□ 0.9
MCCD1P59942 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.65■□□□□ 0.9
MCCD1P59942 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MCCD1P59942 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCCD1P59942 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCCD1P59942 TNXA-203ENST00000507684 2038 ntBASIC20.65■□□□□ 0.9
MCCD1P59942 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCCD1P59942 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MCCD1P59942 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.64■□□□□ 0.9
MCCD1P59942 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCCD1P59942 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCCD1P59942 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.64■□□□□ 0.89
MCCD1P59942 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCCD1P59942 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.64■□□□□ 0.89
MCCD1P59942 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCCD1P59942 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MCCD1P59942 AC008550.1-201ENST00000511500 884 ntBASIC20.64■□□□□ 0.89
MCCD1P59942 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MCCD1P59942 DGCR10-201ENST00000609839 495 ntBASIC20.64■□□□□ 0.89
MCCD1P59942 AC011298.2-201ENST00000617989 482 ntBASIC20.64■□□□□ 0.89
MCCD1P59942 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MCCD1P59942 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MCCD1P59942 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.64■□□□□ 0.89
MCCD1P59942 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.64■□□□□ 0.89
MCCD1P59942 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MCCD1P59942 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 KRT8P3-201ENST00000519669 1449 ntBASIC20.63■□□□□ 0.89
MCCD1P59942 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.63■□□□□ 0.89
MCCD1P59942 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.63■□□□□ 0.89
MCCD1P59942 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.63■□□□□ 0.89
MCCD1P59942 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.63■□□□□ 0.89
MCCD1P59942 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.63■□□□□ 0.89
MCCD1P59942 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.63■□□□□ 0.89
MCCD1P59942 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.63■□□□□ 0.89
MCCD1P59942 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MCCD1P59942 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.62■□□□□ 0.89
MCCD1P59942 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
MCCD1P59942 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.62■□□□□ 0.89
MCCD1P59942 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.62■□□□□ 0.89
MCCD1P59942 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MCCD1P59942 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCCD1P59942 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms