Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.57■□□□□ 0.88
VCPP55072 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.57■□□□□ 0.88
VCPP55072 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.57■□□□□ 0.88
VCPP55072 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.57■□□□□ 0.88
VCPP55072 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.57■□□□□ 0.88
VCPP55072 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.57■□□□□ 0.88
VCPP55072 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCPP55072 AC009237.14-201ENST00000609975 1594 ntBASIC20.57■□□□□ 0.88
VCPP55072 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCPP55072 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VCPP55072 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCPP55072 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
VCPP55072 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCPP55072 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VCPP55072 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.56■□□□□ 0.88
VCPP55072 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.56■□□□□ 0.88
VCPP55072 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.56■□□□□ 0.88
VCPP55072 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.56■□□□□ 0.88
VCPP55072 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
VCPP55072 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VCPP55072 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VCPP55072 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.56■□□□□ 0.88
VCPP55072 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VCPP55072 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.56■□□□□ 0.88
VCPP55072 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCPP55072 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.55■□□□□ 0.88
VCPP55072 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.55■□□□□ 0.88
VCPP55072 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.55■□□□□ 0.88
VCPP55072 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.55■□□□□ 0.88
VCPP55072 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 AK4P3-201ENST00000418260 669 ntBASIC20.55■□□□□ 0.88
VCPP55072 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 AC116562.2-201ENST00000507042 360 ntBASIC20.55■□□□□ 0.88
VCPP55072 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.55■□□□□ 0.88
VCPP55072 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.55■□□□□ 0.88
VCPP55072 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.55■□□□□ 0.88
VCPP55072 AL121906.2-201ENST00000621597 723 ntBASIC20.55■□□□□ 0.88
VCPP55072 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
VCPP55072 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.55■□□□□ 0.88
VCPP55072 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.55■□□□□ 0.88
VCPP55072 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VCPP55072 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.54■□□□□ 0.88
VCPP55072 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VCPP55072 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.54■□□□□ 0.88
VCPP55072 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.54■□□□□ 0.88
VCPP55072 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.54■□□□□ 0.88
VCPP55072 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
VCPP55072 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.54■□□□□ 0.88
VCPP55072 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
VCPP55072 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.54■□□□□ 0.88
VCPP55072 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
VCPP55072 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.54■□□□□ 0.88
VCPP55072 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
VCPP55072 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.54■□□□□ 0.88
VCPP55072 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCPP55072 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VCPP55072 KRT16P6-202ENST00000425692 1426 ntBASIC20.53■□□□□ 0.88
VCPP55072 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCPP55072 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCPP55072 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VCPP55072 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCPP55072 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.53■□□□□ 0.88
VCPP55072 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VCPP55072 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.53■□□□□ 0.88
VCPP55072 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCPP55072 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VCPP55072 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCPP55072 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCPP55072 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VCPP55072 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.53■□□□□ 0.88
VCPP55072 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.53■□□□□ 0.88
VCPP55072 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.53■□□□□ 0.88
VCPP55072 AC009947.2-201ENST00000444014 672 ntBASIC20.53■□□□□ 0.88
VCPP55072 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms