Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.82■□□□□ 0.76
COPAP53621 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.82■□□□□ 0.76
COPAP53621 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.82■□□□□ 0.76
COPAP53621 RN7SL850P-201ENST00000579959 291 ntBASIC19.82■□□□□ 0.76
COPAP53621 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.82■□□□□ 0.76
COPAP53621 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COPAP53621 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COPAP53621 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPAP53621 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.81■□□□□ 0.76
COPAP53621 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COPAP53621 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
COPAP53621 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
COPAP53621 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 TUBB8P6-201ENST00000436895 1288 ntBASIC19.81■□□□□ 0.76
COPAP53621 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.81■□□□□ 0.76
COPAP53621 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.81■□□□□ 0.76
COPAP53621 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.81■□□□□ 0.76
COPAP53621 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
COPAP53621 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
COPAP53621 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.81■□□□□ 0.76
COPAP53621 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COPAP53621 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPAP53621 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COPAP53621 TMPOP1-202ENST00000424642 1267 ntBASIC19.8■□□□□ 0.76
COPAP53621 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 AC026271.3-201ENST00000571884 352 ntBASIC19.8■□□□□ 0.76
COPAP53621 AC010947.1-201ENST00000623454 693 ntBASIC19.8■□□□□ 0.76
COPAP53621 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COPAP53621 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.8■□□□□ 0.76
COPAP53621 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 AC125437.2-201ENST00000625180 2167 ntBASIC19.8■□□□□ 0.76
COPAP53621 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPAP53621 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.8■□□□□ 0.76
COPAP53621 AL158211.5-201ENST00000623583 2518 ntBASIC19.79■□□□□ 0.76
COPAP53621 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COPAP53621 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COPAP53621 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.79■□□□□ 0.76
COPAP53621 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 AC004980.1-204ENST00000429707 299 ntBASIC19.79■□□□□ 0.76
COPAP53621 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.79■□□□□ 0.76
COPAP53621 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.79■□□□□ 0.76
COPAP53621 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 AP000974.1-201ENST00000623909 2387 ntBASIC19.79■□□□□ 0.76
COPAP53621 LINC01568-207ENST00000641790 1380 ntBASIC19.79■□□□□ 0.76
COPAP53621 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.79■□□□□ 0.76
COPAP53621 FSCN1P1-201ENST00000568912 1481 ntBASIC19.79■□□□□ 0.76
COPAP53621 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COPAP53621 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
COPAP53621 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COPAP53621 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.79■□□□□ 0.76
COPAP53621 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPAP53621 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPAP53621 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COPAP53621 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms