Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF140P52738 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF140P52738 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF140P52738 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZNF140P52738 RPS2P55-201ENST00000397318 883 ntBASIC19.16■□□□□ 0.66
ZNF140P52738 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF140P52738 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.16■□□□□ 0.66
ZNF140P52738 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 AC107956.1-201ENST00000494359 873 ntBASIC19.16■□□□□ 0.66
ZNF140P52738 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF140P52738 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF140P52738 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF140P52738 AL049812.1-201ENST00000432563 2267 ntBASIC19.16■□□□□ 0.66
ZNF140P52738 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF140P52738 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF140P52738 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF140P52738 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF140P52738 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 RCC2P6-201ENST00000526625 1557 ntBASIC19.15■□□□□ 0.66
ZNF140P52738 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNF140P52738 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF140P52738 AC233702.5-201ENST00000584107 538 ntBASIC19.15■□□□□ 0.66
ZNF140P52738 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNF140P52738 AP000974.1-201ENST00000623909 2387 ntBASIC19.15■□□□□ 0.66
ZNF140P52738 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF140P52738 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF140P52738 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF140P52738 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF140P52738 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.14■□□□□ 0.66
ZNF140P52738 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.14■□□□□ 0.65
ZNF140P52738 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 FP475955.4-201ENST00000623131 1990 ntBASIC19.14■□□□□ 0.65
ZNF140P52738 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZNF140P52738 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZNF140P52738 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ZNF140P52738 FAM197Y1-201ENST00000421178 764 ntBASIC19.14■□□□□ 0.65
ZNF140P52738 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF140P52738 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF140P52738 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ZNF140P52738 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF140P52738 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF140P52738 AL031985.4-201ENST00000642138 673 ntBASIC19.14■□□□□ 0.65
ZNF140P52738 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZNF140P52738 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.14■□□□□ 0.65
ZNF140P52738 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF140P52738 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF140P52738 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF140P52738 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.14■□□□□ 0.65
ZNF140P52738 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF140P52738 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ZNF140P52738 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF140P52738 AC098818.2-201ENST00000564925 2320 ntBASIC19.13■□□□□ 0.65
ZNF140P52738 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF140P52738 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF140P52738 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 CD177P1-201ENST00000606252 935 ntBASIC19.13■□□□□ 0.65
ZNF140P52738 AC113410.3-201ENST00000623366 203 ntBASIC19.13■□□□□ 0.65
ZNF140P52738 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF140P52738 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF140P52738 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF140P52738 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZNF140P52738 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms