Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.25■□□□□ 0.99
GPC3P51654 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GPC3P51654 AL158211.5-201ENST00000623583 2518 ntBASIC21.25■□□□□ 0.99
GPC3P51654 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.25■□□□□ 0.99
GPC3P51654 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.25■□□□□ 0.99
GPC3P51654 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPC3P51654 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.25■□□□□ 0.99
GPC3P51654 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPC3P51654 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.24■□□□□ 0.99
GPC3P51654 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.24■□□□□ 0.99
GPC3P51654 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
GPC3P51654 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.24■□□□□ 0.99
GPC3P51654 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.24■□□□□ 0.99
GPC3P51654 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
GPC3P51654 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.24■□□□□ 0.99
GPC3P51654 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.24■□□□□ 0.99
GPC3P51654 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.24■□□□□ 0.99
GPC3P51654 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.24■□□□□ 0.99
GPC3P51654 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.24■□□□□ 0.99
GPC3P51654 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC3P51654 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
GPC3P51654 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.23■□□□□ 0.99
GPC3P51654 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
GPC3P51654 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.23■□□□□ 0.99
GPC3P51654 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.23■□□□□ 0.99
GPC3P51654 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.23■□□□□ 0.99
GPC3P51654 AC128688.1-201ENST00000487626 519 ntBASIC21.23■□□□□ 0.99
GPC3P51654 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.23■□□□□ 0.99
GPC3P51654 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
GPC3P51654 FAM87A-204ENST00000613235 858 ntBASIC21.23■□□□□ 0.99
GPC3P51654 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.23■□□□□ 0.99
GPC3P51654 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.23■□□□□ 0.99
GPC3P51654 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.23■□□□□ 0.99
GPC3P51654 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.23■□□□□ 0.99
GPC3P51654 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GPC3P51654 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC3P51654 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC3P51654 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
GPC3P51654 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GPC3P51654 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC3P51654 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC3P51654 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
GPC3P51654 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC3P51654 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.22■□□□□ 0.99
GPC3P51654 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.22■□□□□ 0.99
GPC3P51654 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
GPC3P51654 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.22■□□□□ 0.99
GPC3P51654 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GPC3P51654 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.22■□□□□ 0.99
GPC3P51654 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC3P51654 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC3P51654 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC3P51654 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
GPC3P51654 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC3P51654 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GPC3P51654 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.21■□□□□ 0.99
GPC3P51654 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.21■□□□□ 0.99
GPC3P51654 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.21■□□□□ 0.99
GPC3P51654 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.21■□□□□ 0.99
GPC3P51654 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.21■□□□□ 0.99
GPC3P51654 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GPC3P51654 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GPC3P51654 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC3P51654 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.2■□□□□ 0.98
GPC3P51654 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC3P51654 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms