Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK7P50613 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK7P50613 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK7P50613 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CDK7P50613 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.26■□□□□ 0.99
CDK7P50613 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK7P50613 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK7P50613 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDK7P50613 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.26■□□□□ 0.99
CDK7P50613 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK7P50613 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK7P50613 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDK7P50613 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK7P50613 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK7P50613 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK7P50613 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CDK7P50613 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK7P50613 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.25■□□□□ 0.99
CDK7P50613 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CDK7P50613 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.25■□□□□ 0.99
CDK7P50613 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDK7P50613 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK7P50613 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.25■□□□□ 0.99
CDK7P50613 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK7P50613 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK7P50613 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.24■□□□□ 0.99
CDK7P50613 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.24■□□□□ 0.99
CDK7P50613 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK7P50613 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK7P50613 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK7P50613 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK7P50613 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDK7P50613 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK7P50613 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDK7P50613 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDK7P50613 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK7P50613 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.24■□□□□ 0.99
CDK7P50613 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK7P50613 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDK7P50613 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK7P50613 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK7P50613 HBZP1-201ENST00000354915 429 ntBASIC21.23■□□□□ 0.99
CDK7P50613 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK7P50613 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK7P50613 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK7P50613 MIR4674-201ENST00000582457 87 ntBASIC21.23■□□□□ 0.99
CDK7P50613 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK7P50613 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDK7P50613 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.23■□□□□ 0.99
CDK7P50613 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.23■□□□□ 0.99
CDK7P50613 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK7P50613 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK7P50613 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDK7P50613 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.22■□□□□ 0.99
CDK7P50613 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CDK7P50613 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.22■□□□□ 0.99
CDK7P50613 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK7P50613 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK7P50613 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CDK7P50613 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDK7P50613 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.21■□□□□ 0.99
CDK7P50613 AC246785.2-201ENST00000432512 513 ntBASIC21.21■□□□□ 0.99
CDK7P50613 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.21■□□□□ 0.99
CDK7P50613 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.21■□□□□ 0.99
CDK7P50613 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK7P50613 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.21■□□□□ 0.99
CDK7P50613 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.21■□□□□ 0.99
CDK7P50613 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 AC092119.3-201ENST00000612618 583 ntBASIC21.21■□□□□ 0.99
CDK7P50613 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK7P50613 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms