Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2AP49459 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 LETM1P2-201ENST00000597330 2178 ntBASIC12.19□□□□□ -0.46
UBE2AP49459 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UBE2AP49459 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UBE2AP49459 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UBE2AP49459 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UBE2AP49459 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2AP49459 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UBE2AP49459 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
UBE2AP49459 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 AC097658.1-201ENST00000475555 843 ntBASIC12.18□□□□□ -0.46
UBE2AP49459 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.18□□□□□ -0.46
UBE2AP49459 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.18□□□□□ -0.46
UBE2AP49459 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.18□□□□□ -0.46
UBE2AP49459 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
UBE2AP49459 RAP2CP1-201ENST00000605103 478 ntBASIC12.18□□□□□ -0.46
UBE2AP49459 AC092666.2-201ENST00000613287 246 ntBASIC12.18□□□□□ -0.46
UBE2AP49459 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.18□□□□□ -0.46
UBE2AP49459 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.18□□□□□ -0.46
UBE2AP49459 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2AP49459 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2AP49459 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2AP49459 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.18□□□□□ -0.46
UBE2AP49459 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2AP49459 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
UBE2AP49459 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
UBE2AP49459 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.17□□□□□ -0.46
UBE2AP49459 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.17□□□□□ -0.46
UBE2AP49459 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2AP49459 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
UBE2AP49459 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
UBE2AP49459 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2AP49459 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
UBE2AP49459 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2AP49459 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2AP49459 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2AP49459 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 AC092118.2-201ENST00000613495 667 ntBASIC12.17□□□□□ -0.46
UBE2AP49459 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2AP49459 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms