Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CENPFP49454 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
CENPFP49454 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
CENPFP49454 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CENPFP49454 HLA-F-220ENST00000434407 884 ntBASIC21.72■■□□□ 1.07
CENPFP49454 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CENPFP49454 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.72■■□□□ 1.07
CENPFP49454 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CENPFP49454 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CENPFP49454 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CENPFP49454 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.72■■□□□ 1.07
CENPFP49454 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CENPFP49454 AC117500.6-201ENST00000624871 588 ntBASIC21.72■■□□□ 1.07
CENPFP49454 AF228730.7-201ENST00000641842 219 ntBASIC21.72■■□□□ 1.07
CENPFP49454 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CENPFP49454 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CENPFP49454 KRT8P8-201ENST00000434750 1448 ntBASIC21.72■■□□□ 1.07
CENPFP49454 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CENPFP49454 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.72■■□□□ 1.07
CENPFP49454 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.71■■□□□ 1.07
CENPFP49454 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.71■■□□□ 1.07
CENPFP49454 TSSC2-201ENST00000450217 709 ntBASIC21.71■■□□□ 1.07
CENPFP49454 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.71■■□□□ 1.07
CENPFP49454 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.71■■□□□ 1.07
CENPFP49454 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CENPFP49454 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CENPFP49454 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CENPFP49454 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CENPFP49454 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CENPFP49454 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CENPFP49454 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.71■■□□□ 1.07
CENPFP49454 AC036111.1-201ENST00000533973 1582 ntBASIC21.71■■□□□ 1.07
CENPFP49454 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CENPFP49454 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.71■■□□□ 1.07
CENPFP49454 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.71■■□□□ 1.07
CENPFP49454 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.71■■□□□ 1.07
CENPFP49454 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.7■■□□□ 1.07
CENPFP49454 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
CENPFP49454 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.7■■□□□ 1.07
CENPFP49454 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.7■■□□□ 1.07
CENPFP49454 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CENPFP49454 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.7■■□□□ 1.07
CENPFP49454 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CENPFP49454 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CENPFP49454 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.7■■□□□ 1.06
CENPFP49454 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.7■■□□□ 1.06
CENPFP49454 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.7■■□□□ 1.06
CENPFP49454 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.7■■□□□ 1.06
CENPFP49454 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.7■■□□□ 1.06
CENPFP49454 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
CENPFP49454 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.7■■□□□ 1.06
CENPFP49454 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.7■■□□□ 1.06
CENPFP49454 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.7■■□□□ 1.06
CENPFP49454 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CENPFP49454 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.7■■□□□ 1.06
CENPFP49454 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CENPFP49454 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.7■■□□□ 1.06
CENPFP49454 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.7■■□□□ 1.06
CENPFP49454 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CENPFP49454 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CENPFP49454 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.69■■□□□ 1.06
CENPFP49454 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CENPFP49454 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.69■■□□□ 1.06
CENPFP49454 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CENPFP49454 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.69■■□□□ 1.06
CENPFP49454 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.69■■□□□ 1.06
CENPFP49454 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CENPFP49454 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CENPFP49454 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.69■■□□□ 1.06
CENPFP49454 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.69■■□□□ 1.06
CENPFP49454 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CENPFP49454 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CENPFP49454 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CENPFP49454 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CENPFP49454 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CENPFP49454 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 AL117328.2-201ENST00000624617 1940 ntBASIC21.68■■□□□ 1.06
CENPFP49454 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.68■■□□□ 1.06
CENPFP49454 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.68■■□□□ 1.06
CENPFP49454 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.68■■□□□ 1.06
CENPFP49454 FOSL1P1-201ENST00000511041 816 ntBASIC21.68■■□□□ 1.06
CENPFP49454 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CENPFP49454 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms