Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC9A3P48764 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC9A3P48764 AL121906.2-201ENST00000621597 723 ntBASIC17.6■□□□□ 0.41
SLC9A3P48764 HLA-B-256ENST00000639848 1089 ntBASIC17.6■□□□□ 0.41
SLC9A3P48764 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SLC9A3P48764 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC9A3P48764 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC9A3P48764 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SLC9A3P48764 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC9A3P48764 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC9A3P48764 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC9A3P48764 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 AC124283.5-201ENST00000624661 1809 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SLC9A3P48764 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC9A3P48764 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 NCF1B-203ENST00000435988 1254 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 GUSBP6-202ENST00000438529 1198 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 TSPY6P-201ENST00000448518 926 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 RPS2P52-201ENST00000469610 820 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 AC097658.1-201ENST00000475555 843 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 AC006557.6-201ENST00000623071 864 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC9A3P48764 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC9A3P48764 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC9A3P48764 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 AL049812.1-201ENST00000432563 2267 ntBASIC17.59■□□□□ 0.41
SLC9A3P48764 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC9A3P48764 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC9A3P48764 ZNF815P-204ENST00000434898 1737 ntBASIC17.58■□□□□ 0.41
SLC9A3P48764 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC9A3P48764 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC9A3P48764 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC9A3P48764 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SLC9A3P48764 AC079598.2-202ENST00000546624 1451 ntBASIC17.58■□□□□ 0.41
SLC9A3P48764 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC9A3P48764 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC9A3P48764 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC9A3P48764 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC9A3P48764 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC9A3P48764 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC9A3P48764 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.58■□□□□ 0.4
SLC9A3P48764 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC9A3P48764 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC9A3P48764 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC9A3P48764 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC9A3P48764 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC9A3P48764 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.58■□□□□ 0.4
SLC9A3P48764 MYC-209ENST00000641252 345 ntBASIC17.58■□□□□ 0.4
SLC9A3P48764 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
SLC9A3P48764 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 FZD10-202ENST00000539839 3282 ntBASIC17.58■□□□□ 0.4
SLC9A3P48764 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
SLC9A3P48764 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC9A3P48764 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC9A3P48764 AC092368.3-202ENST00000574180 1591 ntBASIC17.57■□□□□ 0.4
SLC9A3P48764 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC9A3P48764 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC9A3P48764 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC9A3P48764 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC9A3P48764 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC9A3P48764 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
SLC9A3P48764 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SLC9A3P48764 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms