Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGCLP35914 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLP35914 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLP35914 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HMGCLP35914 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HMGCLP35914 AL355355.2-201ENST00000442321 338 ntBASIC19.16■□□□□ 0.66
HMGCLP35914 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 AC091390.4-202ENST00000476426 537 ntBASIC19.16■□□□□ 0.66
HMGCLP35914 AC093827.2-201ENST00000512654 315 ntBASIC19.16■□□□□ 0.66
HMGCLP35914 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLP35914 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.16■□□□□ 0.66
HMGCLP35914 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HMGCLP35914 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.16■□□□□ 0.66
HMGCLP35914 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCLP35914 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLP35914 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.16■□□□□ 0.66
HMGCLP35914 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HMGCLP35914 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
HMGCLP35914 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLP35914 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCLP35914 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLP35914 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
HMGCLP35914 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HMGCLP35914 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HMGCLP35914 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.15■□□□□ 0.66
HMGCLP35914 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCLP35914 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HMGCLP35914 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCLP35914 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.15■□□□□ 0.66
HMGCLP35914 MIR4497-201ENST00000583208 89 ntBASIC19.15■□□□□ 0.66
HMGCLP35914 MIR4785-201ENST00000585005 73 ntBASIC19.15■□□□□ 0.66
HMGCLP35914 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCLP35914 AC011298.2-201ENST00000617989 482 ntBASIC19.15■□□□□ 0.66
HMGCLP35914 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.15■□□□□ 0.66
HMGCLP35914 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLP35914 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HMGCLP35914 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
HMGCLP35914 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
HMGCLP35914 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGCLP35914 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGCLP35914 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGCLP35914 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 TSPY7P-201ENST00000431358 1114 ntBASIC19.14■□□□□ 0.65
HMGCLP35914 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 SNORA78-201ENST00000459373 127 ntBASIC19.14■□□□□ 0.65
HMGCLP35914 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGCLP35914 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGCLP35914 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGCLP35914 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGCLP35914 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGCLP35914 REXO1L10P-201ENST00000615707 1290 ntBASIC19.14■□□□□ 0.65
HMGCLP35914 REXO1L12P-201ENST00000622156 912 ntBASIC19.14■□□□□ 0.65
HMGCLP35914 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGCLP35914 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HMGCLP35914 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGCLP35914 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGCLP35914 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGCLP35914 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCLP35914 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HMGCLP35914 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCLP35914 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HMGCLP35914 TSPY23P-201ENST00000440136 739 ntBASIC19.13■□□□□ 0.65
HMGCLP35914 AC008040.2-201ENST00000461049 708 ntBASIC19.13■□□□□ 0.65
HMGCLP35914 AP003071.4-201ENST00000562276 1284 ntBASIC19.13■□□□□ 0.65
HMGCLP35914 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms