Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC12P31275 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HOXC12P31275 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC12P31275 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC12P31275 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC12P31275 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC12P31275 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC12P31275 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC12P31275 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC12P31275 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXC12P31275 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 AC112907.3-201ENST00000577781 2400 ntBASIC17.06■□□□□ 0.32
HOXC12P31275 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC12P31275 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC12P31275 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXC12P31275 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXC12P31275 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXC12P31275 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
HOXC12P31275 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXC12P31275 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXC12P31275 FAM197Y1-201ENST00000421178 764 ntBASIC17.05■□□□□ 0.32
HOXC12P31275 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC12P31275 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC12P31275 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC12P31275 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXC12P31275 CR392000.1-201ENST00000624770 1228 ntBASIC17.05■□□□□ 0.32
HOXC12P31275 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC12P31275 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC12P31275 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXC12P31275 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC12P31275 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
HOXC12P31275 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 AC113347.1-201ENST00000413321 391 ntBASIC17.04■□□□□ 0.32
HOXC12P31275 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC12P31275 RBM17P1-201ENST00000453646 1190 ntBASIC17.04■□□□□ 0.32
HOXC12P31275 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC12P31275 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC12P31275 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HOXC12P31275 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXC12P31275 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC12P31275 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC12P31275 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC12P31275 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC12P31275 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms