Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PTPN3P26045 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 TNXA-203ENST00000507684 2038 ntBASIC19.61■□□□□ 0.73
PTPN3P26045 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPN3P26045 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPN3P26045 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN3P26045 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN3P26045 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN3P26045 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN3P26045 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN3P26045 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PTPN3P26045 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PTPN3P26045 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN3P26045 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PTPN3P26045 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTPN3P26045 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTPN3P26045 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PTPN3P26045 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN3P26045 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN3P26045 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PTPN3P26045 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTPN3P26045 AL359736.2-201ENST00000621992 437 ntBASIC19.6■□□□□ 0.73
PTPN3P26045 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPN3P26045 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN3P26045 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PTPN3P26045 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN3P26045 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN3P26045 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN3P26045 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPN3P26045 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PTPN3P26045 IRX1P1-201ENST00000438849 1838 ntBASIC19.6■□□□□ 0.73
PTPN3P26045 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN3P26045 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 HTR7P1-201ENST00000538670 1336 ntBASIC19.59■□□□□ 0.73
PTPN3P26045 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPN3P26045 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 PRORSD1P-201ENST00000295112 541 ntBASIC19.59■□□□□ 0.73
PTPN3P26045 KRT18P29-201ENST00000397031 1267 ntBASIC19.59■□□□□ 0.73
PTPN3P26045 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PTPN3P26045 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPN3P26045 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN3P26045 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN3P26045 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPN3P26045 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPN3P26045 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN3P26045 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN3P26045 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PTPN3P26045 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN3P26045 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN3P26045 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN3P26045 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.58■□□□□ 0.72
PTPN3P26045 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN3P26045 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PTPN3P26045 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.58■□□□□ 0.72
PTPN3P26045 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN3P26045 AL445675.2-201ENST00000620291 557 ntBASIC19.58■□□□□ 0.72
PTPN3P26045 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN3P26045 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN3P26045 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms