Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.02■□□□□ 0.64
BCKDHBP21953 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.02■□□□□ 0.64
BCKDHBP21953 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BCKDHBP21953 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.02■□□□□ 0.64
BCKDHBP21953 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BCKDHBP21953 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.02■□□□□ 0.64
BCKDHBP21953 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.63
BCKDHBP21953 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
BCKDHBP21953 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BCKDHBP21953 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BCKDHBP21953 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.01■□□□□ 0.63
BCKDHBP21953 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BCKDHBP21953 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.01■□□□□ 0.63
BCKDHBP21953 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BCKDHBP21953 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.01■□□□□ 0.63
BCKDHBP21953 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 AL645929.1-201ENST00000420084 975 ntBASIC19.01■□□□□ 0.63
BCKDHBP21953 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.01■□□□□ 0.63
BCKDHBP21953 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BCKDHBP21953 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BCKDHBP21953 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.01■□□□□ 0.63
BCKDHBP21953 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BCKDHBP21953 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19■□□□□ 0.63
BCKDHBP21953 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BCKDHBP21953 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19■□□□□ 0.63
BCKDHBP21953 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19■□□□□ 0.63
BCKDHBP21953 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19■□□□□ 0.63
BCKDHBP21953 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BCKDHBP21953 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
BCKDHBP21953 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19■□□□□ 0.63
BCKDHBP21953 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19■□□□□ 0.63
BCKDHBP21953 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BCKDHBP21953 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BCKDHBP21953 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BCKDHBP21953 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BCKDHBP21953 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BCKDHBP21953 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BCKDHBP21953 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.99■□□□□ 0.63
BCKDHBP21953 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 AC009237.14-201ENST00000609975 1594 ntBASIC18.99■□□□□ 0.63
BCKDHBP21953 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.99■□□□□ 0.63
BCKDHBP21953 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 RASA4DP-201ENST00000460726 1199 ntBASIC18.99■□□□□ 0.63
BCKDHBP21953 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.99■□□□□ 0.63
BCKDHBP21953 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.99■□□□□ 0.63
BCKDHBP21953 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.99■□□□□ 0.63
BCKDHBP21953 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
BCKDHBP21953 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
BCKDHBP21953 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
BCKDHBP21953 AC007375.3-201ENST00000600936 2314 ntBASIC18.99■□□□□ 0.63
BCKDHBP21953 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
BCKDHBP21953 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.98■□□□□ 0.63
BCKDHBP21953 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.98■□□□□ 0.63
BCKDHBP21953 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.98■□□□□ 0.63
BCKDHBP21953 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BCKDHBP21953 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.98■□□□□ 0.63
BCKDHBP21953 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
BCKDHBP21953 PRELID1P1-202ENST00000567272 903 ntBASIC18.98■□□□□ 0.63
BCKDHBP21953 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
BCKDHBP21953 MIR3652-201ENST00000579335 131 ntBASIC18.98■□□□□ 0.63
BCKDHBP21953 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.98■□□□□ 0.63
BCKDHBP21953 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
BCKDHBP21953 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms