Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 AL390719.1-204ENST00000412397 1219 ntBASIC16.32■□□□□ 0.2
HIST1H1DP16402 AC073210.2-201ENST00000430369 194 ntBASIC16.32■□□□□ 0.2
HIST1H1DP16402 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H1DP16402 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H1DP16402 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H1DP16402 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H1DP16402 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 AC090340.1-201ENST00000620778 4980 ntBASIC16.3■□□□□ 0.2
HIST1H1DP16402 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H1DP16402 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H1DP16402 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H1DP16402 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H1DP16402 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms