Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL160286.2-201ENST00000567150 934 ntBASIC20.19■□□□□ 0.82
PDGFRAP16234 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDGFRAP16234 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.19■□□□□ 0.82
PDGFRAP16234 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.19■□□□□ 0.82
PDGFRAP16234 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDGFRAP16234 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFRAP16234 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFRAP16234 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PDGFRAP16234 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PDGFRAP16234 RPS2P55-201ENST00000397318 883 ntBASIC20.18■□□□□ 0.82
PDGFRAP16234 AC107956.1-201ENST00000494359 873 ntBASIC20.18■□□□□ 0.82
PDGFRAP16234 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.18■□□□□ 0.82
PDGFRAP16234 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFRAP16234 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.18■□□□□ 0.82
PDGFRAP16234 RARRES2P10-201ENST00000564312 460 ntBASIC20.18■□□□□ 0.82
PDGFRAP16234 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.18■□□□□ 0.82
PDGFRAP16234 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PDGFRAP16234 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFRAP16234 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDGFRAP16234 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.18■□□□□ 0.82
PDGFRAP16234 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFRAP16234 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFRAP16234 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFRAP16234 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.17■□□□□ 0.82
PDGFRAP16234 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFRAP16234 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFRAP16234 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFRAP16234 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDGFRAP16234 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFRAP16234 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFRAP16234 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDGFRAP16234 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFRAP16234 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFRAP16234 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFRAP16234 AC012618.2-201ENST00000428058 849 ntBASIC20.17■□□□□ 0.82
PDGFRAP16234 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFRAP16234 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDGFRAP16234 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.17■□□□□ 0.82
PDGFRAP16234 AC233702.5-201ENST00000584107 538 ntBASIC20.17■□□□□ 0.82
PDGFRAP16234 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDGFRAP16234 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.17■□□□□ 0.82
PDGFRAP16234 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.17■□□□□ 0.82
PDGFRAP16234 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.17■□□□□ 0.82
PDGFRAP16234 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFRAP16234 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.16■□□□□ 0.82
PDGFRAP16234 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFRAP16234 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 AC120498.9-201ENST00000339021 3867 ntBASIC20.16■□□□□ 0.82
PDGFRAP16234 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFRAP16234 AC141586.3-201ENST00000562166 1838 ntBASIC20.16■□□□□ 0.82
PDGFRAP16234 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 NIFKP9-201ENST00000419265 221 ntBASIC20.16■□□□□ 0.82
PDGFRAP16234 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.16■□□□□ 0.82
PDGFRAP16234 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 AP002982.1-201ENST00000492365 877 ntBASIC20.16■□□□□ 0.82
PDGFRAP16234 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.16■□□□□ 0.82
PDGFRAP16234 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFRAP16234 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 AL135905.2-201ENST00000584934 1404 ntBASIC20.16■□□□□ 0.82
PDGFRAP16234 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFRAP16234 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFRAP16234 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PDGFRAP16234 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFRAP16234 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFRAP16234 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.15■□□□□ 0.82
PDGFRAP16234 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFRAP16234 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PDGFRAP16234 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PDGFRAP16234 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFRAP16234 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PDGFRAP16234 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.15■□□□□ 0.82
PDGFRAP16234 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PDGFRAP16234 SNORA78-201ENST00000459373 127 ntBASIC20.15■□□□□ 0.82
PDGFRAP16234 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.15■□□□□ 0.82
PDGFRAP16234 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.15■□□□□ 0.82
PDGFRAP16234 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFRAP16234 AL353708.3-201ENST00000610272 989 ntBASIC20.15■□□□□ 0.82
PDGFRAP16234 AL445675.2-201ENST00000620291 557 ntBASIC20.15■□□□□ 0.82
PDGFRAP16234 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PDGFRAP16234 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms