Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL11A2P13942 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL11A2P13942 KRT18P1-202ENST00000452408 1331 ntBASIC23.6■■□□□ 1.37
COL11A2P13942 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL11A2P13942 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
COL11A2P13942 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.59■■□□□ 1.37
COL11A2P13942 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.59■■□□□ 1.37
COL11A2P13942 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.59■■□□□ 1.37
COL11A2P13942 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.59■■□□□ 1.37
COL11A2P13942 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.59■■□□□ 1.37
COL11A2P13942 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL11A2P13942 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.59■■□□□ 1.37
COL11A2P13942 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.59■■□□□ 1.37
COL11A2P13942 AC012615.1-201ENST00000565797 1299 ntBASIC23.59■■□□□ 1.37
COL11A2P13942 AL157888.1-201ENST00000631930 593 ntBASIC23.59■■□□□ 1.37
COL11A2P13942 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
COL11A2P13942 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.59■■□□□ 1.37
COL11A2P13942 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.58■■□□□ 1.37
COL11A2P13942 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
COL11A2P13942 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
COL11A2P13942 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 AC009237.14-201ENST00000609975 1594 ntBASIC23.58■■□□□ 1.37
COL11A2P13942 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.58■■□□□ 1.37
COL11A2P13942 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.58■■□□□ 1.37
COL11A2P13942 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.58■■□□□ 1.37
COL11A2P13942 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A2P13942 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.58■■□□□ 1.37
COL11A2P13942 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
COL11A2P13942 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
COL11A2P13942 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
COL11A2P13942 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
COL11A2P13942 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
COL11A2P13942 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.58■■□□□ 1.36
COL11A2P13942 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
COL11A2P13942 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.57■■□□□ 1.36
COL11A2P13942 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.57■■□□□ 1.36
COL11A2P13942 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.57■■□□□ 1.36
COL11A2P13942 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.57■■□□□ 1.36
COL11A2P13942 AC104692.2-201ENST00000603054 253 ntBASIC23.57■■□□□ 1.36
COL11A2P13942 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.57■■□□□ 1.36
COL11A2P13942 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.57■■□□□ 1.36
COL11A2P13942 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.57■■□□□ 1.36
COL11A2P13942 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A2P13942 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL11A2P13942 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
COL11A2P13942 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 AC024243.1-201ENST00000609234 778 ntBASIC23.56■■□□□ 1.36
COL11A2P13942 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL11A2P13942 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A2P13942 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A2P13942 KRT8P26-201ENST00000534154 1276 ntBASIC23.56■■□□□ 1.36
COL11A2P13942 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.56■■□□□ 1.36
COL11A2P13942 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.56■■□□□ 1.36
COL11A2P13942 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.56■■□□□ 1.36
COL11A2P13942 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.56■■□□□ 1.36
COL11A2P13942 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A2P13942 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL11A2P13942 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.56■■□□□ 1.36
COL11A2P13942 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A2P13942 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.55■■□□□ 1.36
COL11A2P13942 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A2P13942 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
COL11A2P13942 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.55■■□□□ 1.36
COL11A2P13942 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A2P13942 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.55■■□□□ 1.36
COL11A2P13942 AC073314.1-201ENST00000568729 2216 ntBASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms