Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.52■□□□□ 0.88
FAM228BP0C875 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
FAM228BP0C875 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FAM228BP0C875 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FAM228BP0C875 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FAM228BP0C875 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.51■□□□□ 0.87
FAM228BP0C875 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
FAM228BP0C875 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
FAM228BP0C875 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
FAM228BP0C875 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
FAM228BP0C875 AC093525.10-201ENST00000625130 1569 ntBASIC20.51■□□□□ 0.87
FAM228BP0C875 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.51■□□□□ 0.87
FAM228BP0C875 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
FAM228BP0C875 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.51■□□□□ 0.87
FAM228BP0C875 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
FAM228BP0C875 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.51■□□□□ 0.87
FAM228BP0C875 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.51■□□□□ 0.87
FAM228BP0C875 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
FAM228BP0C875 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.51■□□□□ 0.87
FAM228BP0C875 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
FAM228BP0C875 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.51■□□□□ 0.87
FAM228BP0C875 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.51■□□□□ 0.87
FAM228BP0C875 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
FAM228BP0C875 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM228BP0C875 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 FEM1AP3-201ENST00000403722 1741 ntBASIC20.5■□□□□ 0.87
FAM228BP0C875 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FAM228BP0C875 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FAM228BP0C875 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
FAM228BP0C875 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.5■□□□□ 0.87
FAM228BP0C875 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.5■□□□□ 0.87
FAM228BP0C875 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.5■□□□□ 0.87
FAM228BP0C875 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 AC133041.1-202ENST00000642053 222 ntBASIC20.5■□□□□ 0.87
FAM228BP0C875 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.5■□□□□ 0.87
FAM228BP0C875 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
FAM228BP0C875 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM228BP0C875 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.5■□□□□ 0.87
FAM228BP0C875 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
FAM228BP0C875 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.5■□□□□ 0.87
FAM228BP0C875 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 AL512353.2-201ENST00000448759 1962 ntBASIC20.49■□□□□ 0.87
FAM228BP0C875 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.49■□□□□ 0.87
FAM228BP0C875 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.49■□□□□ 0.87
FAM228BP0C875 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
FAM228BP0C875 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.49■□□□□ 0.87
FAM228BP0C875 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.49■□□□□ 0.87
FAM228BP0C875 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.49■□□□□ 0.87
FAM228BP0C875 AC142086.2-201ENST00000569753 217 ntBASIC20.49■□□□□ 0.87
FAM228BP0C875 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 WIZP1-201ENST00000531444 2299 ntBASIC20.49■□□□□ 0.87
FAM228BP0C875 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
FAM228BP0C875 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
FAM228BP0C875 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.49■□□□□ 0.87
FAM228BP0C875 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM228BP0C875 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FAM228BP0C875 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
FAM228BP0C875 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
FAM228BP0C875 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms