Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 KRT8P9-201ENST00000558927 1449 ntBASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.54■□□□□ 0.56
CCNYL3P0C7X3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNYL3P0C7X3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 AL137013.1-201ENST00000432946 1228 ntBASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 C2orf69P3-201ENST00000565542 1120 ntBASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 AL049597.2-201ENST00000565575 961 ntBASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNYL3P0C7X3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNYL3P0C7X3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNYL3P0C7X3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNYL3P0C7X3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.52■□□□□ 0.55
CCNYL3P0C7X3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNYL3P0C7X3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNYL3P0C7X3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 AC005521.1-201ENST00000393351 872 ntBASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 DGCR10-201ENST00000609839 495 ntBASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 CYP2D8P-201ENST00000433633 1490 ntBASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNYL3P0C7X3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms