Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
FREM3P0C091 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.47■□□□□ 0.39
FREM3P0C091 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
FREM3P0C091 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.47■□□□□ 0.39
FREM3P0C091 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
FREM3P0C091 MIR1238-201ENST00000408483 83 ntBASIC17.47■□□□□ 0.39
FREM3P0C091 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.47■□□□□ 0.39
FREM3P0C091 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.47■□□□□ 0.39
FREM3P0C091 AL160286.2-201ENST00000567150 934 ntBASIC17.47■□□□□ 0.39
FREM3P0C091 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.47■□□□□ 0.39
FREM3P0C091 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FREM3P0C091 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FREM3P0C091 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FREM3P0C091 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 TREX1-205ENST00000625293 1783 ntBASIC17.46■□□□□ 0.39
FREM3P0C091 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.46■□□□□ 0.39
FREM3P0C091 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.46■□□□□ 0.39
FREM3P0C091 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 AC113347.1-201ENST00000413321 391 ntBASIC17.46■□□□□ 0.39
FREM3P0C091 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.46■□□□□ 0.39
FREM3P0C091 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.46■□□□□ 0.39
FREM3P0C091 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM3P0C091 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
FREM3P0C091 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
FREM3P0C091 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
FREM3P0C091 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
FREM3P0C091 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.45■□□□□ 0.38
FREM3P0C091 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
FREM3P0C091 FITM1-202ENST00000559294 800 ntBASIC17.45■□□□□ 0.38
FREM3P0C091 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.45■□□□□ 0.38
FREM3P0C091 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.45■□□□□ 0.38
FREM3P0C091 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.45■□□□□ 0.38
FREM3P0C091 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.45■□□□□ 0.38
FREM3P0C091 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
FREM3P0C091 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.45■□□□□ 0.38
FREM3P0C091 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.45■□□□□ 0.38
FREM3P0C091 ECEL1P2-202ENST00000465689 757 ntBASIC17.45■□□□□ 0.38
FREM3P0C091 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.45■□□□□ 0.38
FREM3P0C091 AC096733.2-201ENST00000609937 1394 ntBASIC17.45■□□□□ 0.38
FREM3P0C091 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FREM3P0C091 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.45■□□□□ 0.38
FREM3P0C091 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
FREM3P0C091 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.44■□□□□ 0.38
FREM3P0C091 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.44■□□□□ 0.38
FREM3P0C091 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FREM3P0C091 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.44■□□□□ 0.38
FREM3P0C091 AC007663.1-201ENST00000438948 1240 ntBASIC17.44■□□□□ 0.38
FREM3P0C091 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
FREM3P0C091 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.44■□□□□ 0.38
FREM3P0C091 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
FREM3P0C091 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FREM3P0C091 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FREM3P0C091 LINC01568-207ENST00000641790 1380 ntBASIC17.44■□□□□ 0.38
FREM3P0C091 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.44■□□□□ 0.38
FREM3P0C091 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.44■□□□□ 0.38
FREM3P0C091 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FREM3P0C091 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.44■□□□□ 0.38
FREM3P0C091 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FREM3P0C091 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.44■□□□□ 0.38
FREM3P0C091 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
FREM3P0C091 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.43■□□□□ 0.38
FREM3P0C091 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
FREM3P0C091 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms