Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC008622.2-201ENST00000617006 1229 ntBASIC24.53■■□□□ 1.52
SNRPA1P09661 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 CLDN5-201ENST00000403084 2357 ntBASIC24.53■■□□□ 1.52
SNRPA1P09661 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SNRPA1P09661 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SNRPA1P09661 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
SNRPA1P09661 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SNRPA1P09661 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.52■■□□□ 1.52
SNRPA1P09661 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.52■■□□□ 1.52
SNRPA1P09661 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.52■■□□□ 1.52
SNRPA1P09661 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.52■■□□□ 1.52
SNRPA1P09661 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.52■■□□□ 1.52
SNRPA1P09661 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.52■■□□□ 1.52
SNRPA1P09661 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SNRPA1P09661 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC24.52■■□□□ 1.52
SNRPA1P09661 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.51■■□□□ 1.51
SNRPA1P09661 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNRPA1P09661 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.51■■□□□ 1.51
SNRPA1P09661 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24.51■■□□□ 1.51
SNRPA1P09661 AC009947.2-201ENST00000444014 672 ntBASIC24.51■■□□□ 1.51
SNRPA1P09661 AL359075.1-203ENST00000462729 1002 ntBASIC24.51■■□□□ 1.51
SNRPA1P09661 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.51■■□□□ 1.51
SNRPA1P09661 NEK4P2-201ENST00000580004 1012 ntBASIC24.51■■□□□ 1.51
SNRPA1P09661 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNRPA1P09661 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
SNRPA1P09661 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.51■■□□□ 1.51
SNRPA1P09661 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNRPA1P09661 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNRPA1P09661 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.51■■□□□ 1.51
SNRPA1P09661 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNRPA1P09661 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.51■■□□□ 1.51
SNRPA1P09661 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
SNRPA1P09661 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 AP000523.1-201ENST00000398242 1049 ntBASIC24.5■■□□□ 1.51
SNRPA1P09661 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.5■■□□□ 1.51
SNRPA1P09661 AL121956.5-201ENST00000625261 221 ntBASIC24.5■■□□□ 1.51
SNRPA1P09661 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNRPA1P09661 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.5■■□□□ 1.51
SNRPA1P09661 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.49■■□□□ 1.51
SNRPA1P09661 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.49■■□□□ 1.51
SNRPA1P09661 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNRPA1P09661 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNRPA1P09661 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNRPA1P09661 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.49■■□□□ 1.51
SNRPA1P09661 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SNRPA1P09661 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.49■■□□□ 1.51
SNRPA1P09661 UPK3BP1-201ENST00000428678 509 ntBASIC24.49■■□□□ 1.51
SNRPA1P09661 KRT18P38-201ENST00000449496 1282 ntBASIC24.49■■□□□ 1.51
SNRPA1P09661 FAM86EP-206ENST00000510506 987 ntBASIC24.49■■□□□ 1.51
SNRPA1P09661 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.49■■□□□ 1.51
SNRPA1P09661 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.49■■□□□ 1.51
SNRPA1P09661 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNRPA1P09661 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.49■■□□□ 1.51
SNRPA1P09661 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.49■■□□□ 1.51
SNRPA1P09661 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.49■■□□□ 1.51
SNRPA1P09661 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNRPA1P09661 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.49■■□□□ 1.51
SNRPA1P09661 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
SNRPA1P09661 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.48■■□□□ 1.51
SNRPA1P09661 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNRPA1P09661 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SNRPA1P09661 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SNRPA1P09661 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
SNRPA1P09661 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.48■■□□□ 1.51
SNRPA1P09661 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNRPA1P09661 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.48■■□□□ 1.51
SNRPA1P09661 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNRPA1P09661 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms