Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.74■■□□□ 1.07
HOXC6P09630 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.74■■□□□ 1.07
HOXC6P09630 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.74■■□□□ 1.07
HOXC6P09630 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
HOXC6P09630 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.74■■□□□ 1.07
HOXC6P09630 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HOXC6P09630 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HOXC6P09630 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.73■■□□□ 1.07
HOXC6P09630 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.73■■□□□ 1.07
HOXC6P09630 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 HBZP1-201ENST00000354915 429 ntBASIC21.73■■□□□ 1.07
HOXC6P09630 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.73■■□□□ 1.07
HOXC6P09630 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.73■■□□□ 1.07
HOXC6P09630 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.73■■□□□ 1.07
HOXC6P09630 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.73■■□□□ 1.07
HOXC6P09630 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
HOXC6P09630 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.73■■□□□ 1.07
HOXC6P09630 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC6P09630 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HOXC6P09630 AL157384.1-201ENST00000445995 2473 ntBASIC21.72■■□□□ 1.07
HOXC6P09630 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HOXC6P09630 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.72■■□□□ 1.07
HOXC6P09630 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
HOXC6P09630 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.72■■□□□ 1.07
HOXC6P09630 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.72■■□□□ 1.07
HOXC6P09630 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.72■■□□□ 1.07
HOXC6P09630 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HOXC6P09630 CR769767.2-201ENST00000622735 460 ntBASIC21.72■■□□□ 1.07
HOXC6P09630 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
HOXC6P09630 GABARAPL3-202ENST00000624044 1851 ntBASIC21.72■■□□□ 1.07
HOXC6P09630 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
HOXC6P09630 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.72■■□□□ 1.07
HOXC6P09630 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HOXC6P09630 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.72■■□□□ 1.07
HOXC6P09630 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC6P09630 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 AC092667.1-201ENST00000434301 2586 ntBASIC21.71■■□□□ 1.07
HOXC6P09630 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
HOXC6P09630 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.71■■□□□ 1.07
HOXC6P09630 AC012313.10-201ENST00000623509 926 ntBASIC21.71■■□□□ 1.07
HOXC6P09630 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HOXC6P09630 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC6P09630 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
HOXC6P09630 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.71■■□□□ 1.07
HOXC6P09630 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.7■■□□□ 1.07
HOXC6P09630 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
HOXC6P09630 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
HOXC6P09630 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
HOXC6P09630 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.7■■□□□ 1.06
HOXC6P09630 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.7■■□□□ 1.06
HOXC6P09630 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.7■■□□□ 1.06
HOXC6P09630 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
HOXC6P09630 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HOXC6P09630 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXC6P09630 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms