Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHOP08100 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RHOP08100 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
RHOP08100 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.94■□□□□ 0.78
RHOP08100 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHOP08100 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHOP08100 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.94■□□□□ 0.78
RHOP08100 ZNF815P-204ENST00000434898 1737 ntBASIC19.93■□□□□ 0.78
RHOP08100 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RHOP08100 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.93■□□□□ 0.78
RHOP08100 STARP1-201ENST00000397973 869 ntBASIC19.93■□□□□ 0.78
RHOP08100 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.93■□□□□ 0.78
RHOP08100 VENTXP5-201ENST00000523979 775 ntBASIC19.93■□□□□ 0.78
RHOP08100 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.93■□□□□ 0.78
RHOP08100 AL136038.3-201ENST00000561909 1096 ntBASIC19.93■□□□□ 0.78
RHOP08100 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.93■□□□□ 0.78
RHOP08100 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHOP08100 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RHOP08100 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RHOP08100 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.92■□□□□ 0.78
RHOP08100 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.92■□□□□ 0.78
RHOP08100 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
RHOP08100 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RHOP08100 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RHOP08100 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.92■□□□□ 0.78
RHOP08100 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RHOP08100 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.92■□□□□ 0.78
RHOP08100 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHOP08100 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
RHOP08100 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.91■□□□□ 0.78
RHOP08100 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.91■□□□□ 0.78
RHOP08100 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RHOP08100 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.91■□□□□ 0.78
RHOP08100 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.91■□□□□ 0.78
RHOP08100 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 TSPY23P-201ENST00000440136 739 ntBASIC19.91■□□□□ 0.78
RHOP08100 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.91■□□□□ 0.78
RHOP08100 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.91■□□□□ 0.78
RHOP08100 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.91■□□□□ 0.78
RHOP08100 AC083849.1-201ENST00000615227 514 ntBASIC19.91■□□□□ 0.78
RHOP08100 HYMAI.1-201ENST00000620949 238 ntBASIC19.91■□□□□ 0.78
RHOP08100 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.91■□□□□ 0.78
RHOP08100 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.91■□□□□ 0.78
RHOP08100 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHOP08100 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
RHOP08100 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
RHOP08100 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.9■□□□□ 0.78
RHOP08100 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.9■□□□□ 0.78
RHOP08100 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.9■□□□□ 0.78
RHOP08100 KRT126P-201ENST00000549467 1181 ntBASIC19.9■□□□□ 0.78
RHOP08100 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.9■□□□□ 0.78
RHOP08100 ZNF444P1-201ENST00000559497 298 ntBASIC19.9■□□□□ 0.78
RHOP08100 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.9■□□□□ 0.78
RHOP08100 CR769767.2-201ENST00000622735 460 ntBASIC19.9■□□□□ 0.78
RHOP08100 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.9■□□□□ 0.78
RHOP08100 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.9■□□□□ 0.78
RHOP08100 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RHOP08100 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
RHOP08100 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.9■□□□□ 0.78
RHOP08100 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.9■□□□□ 0.78
RHOP08100 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHOP08100 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms