Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.55■■□□□ 1.04
TPM3P06753 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.55■■□□□ 1.04
TPM3P06753 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.55■■□□□ 1.04
TPM3P06753 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.55■■□□□ 1.04
TPM3P06753 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.55■■□□□ 1.04
TPM3P06753 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.55■■□□□ 1.04
TPM3P06753 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TPM3P06753 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TPM3P06753 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.55■■□□□ 1.04
TPM3P06753 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.55■■□□□ 1.04
TPM3P06753 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.55■■□□□ 1.04
TPM3P06753 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
TPM3P06753 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TPM3P06753 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TPM3P06753 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
TPM3P06753 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.54■■□□□ 1.04
TPM3P06753 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.54■■□□□ 1.04
TPM3P06753 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 KRT18P61-201ENST00000585825 1298 ntBASIC21.54■■□□□ 1.04
TPM3P06753 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TPM3P06753 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.54■■□□□ 1.04
TPM3P06753 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.54■■□□□ 1.04
TPM3P06753 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.54■■□□□ 1.04
TPM3P06753 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TPM3P06753 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.53■■□□□ 1.04
TPM3P06753 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.53■■□□□ 1.04
TPM3P06753 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.53■■□□□ 1.04
TPM3P06753 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.53■■□□□ 1.04
TPM3P06753 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
TPM3P06753 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TPM3P06753 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TPM3P06753 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TPM3P06753 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.53■■□□□ 1.04
TPM3P06753 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.52■■□□□ 1.04
TPM3P06753 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM3P06753 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TPM3P06753 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
TPM3P06753 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM3P06753 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.52■■□□□ 1.04
TPM3P06753 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM3P06753 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM3P06753 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TPM3P06753 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms