Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
SOD2P04179 KRT18P56-201ENST00000507275 550 ntBASIC20.3■□□□□ 0.84
SOD2P04179 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SOD2P04179 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOD2P04179 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SOD2P04179 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOD2P04179 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOD2P04179 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOD2P04179 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOD2P04179 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.3■□□□□ 0.84
SOD2P04179 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOD2P04179 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.29■□□□□ 0.84
SOD2P04179 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOD2P04179 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.29■□□□□ 0.84
SOD2P04179 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SOD2P04179 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.29■□□□□ 0.84
SOD2P04179 AL136038.3-201ENST00000561909 1096 ntBASIC20.29■□□□□ 0.84
SOD2P04179 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.29■□□□□ 0.84
SOD2P04179 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOD2P04179 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SOD2P04179 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOD2P04179 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOD2P04179 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOD2P04179 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
SOD2P04179 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.28■□□□□ 0.84
SOD2P04179 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.28■□□□□ 0.84
SOD2P04179 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SOD2P04179 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.28■□□□□ 0.84
SOD2P04179 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.28■□□□□ 0.84
SOD2P04179 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.28■□□□□ 0.84
SOD2P04179 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.28■□□□□ 0.84
SOD2P04179 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.28■□□□□ 0.84
SOD2P04179 CR769767.2-201ENST00000622735 460 ntBASIC20.28■□□□□ 0.84
SOD2P04179 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.28■□□□□ 0.84
SOD2P04179 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOD2P04179 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SOD2P04179 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SOD2P04179 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.27■□□□□ 0.84
SOD2P04179 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.27■□□□□ 0.84
SOD2P04179 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.27■□□□□ 0.84
SOD2P04179 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.27■□□□□ 0.84
SOD2P04179 VENTXP5-201ENST00000523979 775 ntBASIC20.27■□□□□ 0.84
SOD2P04179 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.27■□□□□ 0.84
SOD2P04179 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.27■□□□□ 0.84
SOD2P04179 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 AC083849.1-201ENST00000615227 514 ntBASIC20.27■□□□□ 0.84
SOD2P04179 HYMAI.1-201ENST00000620949 238 ntBASIC20.27■□□□□ 0.84
SOD2P04179 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD2P04179 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.27■□□□□ 0.83
SOD2P04179 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOD2P04179 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD2P04179 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.26■□□□□ 0.83
SOD2P04179 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.26■□□□□ 0.83
SOD2P04179 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 ZNF444P1-201ENST00000559497 298 ntBASIC20.26■□□□□ 0.83
SOD2P04179 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.26■□□□□ 0.83
SOD2P04179 AC093458.2-201ENST00000623150 629 ntBASIC20.26■□□□□ 0.83
SOD2P04179 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SOD2P04179 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.26■□□□□ 0.83
SOD2P04179 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
SOD2P04179 SDHAP1-207ENST00000440850 2000 ntBASIC20.26■□□□□ 0.83
SOD2P04179 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.25■□□□□ 0.83
SOD2P04179 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
SOD2P04179 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD2P04179 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD2P04179 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SOD2P04179 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD2P04179 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms