Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBC1P01850 AC007952.6-201ENST00000573168 2673 ntBASIC19.29■□□□□ 0.68
TRBC1P01850 AC003957.1-201ENST00000625108 2673 ntBASIC19.29■□□□□ 0.68
TRBC1P01850 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBC1P01850 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBC1P01850 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBC1P01850 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBC1P01850 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRBC1P01850 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBC1P01850 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBC1P01850 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.29■□□□□ 0.68
TRBC1P01850 AC008040.2-201ENST00000461049 708 ntBASIC19.29■□□□□ 0.68
TRBC1P01850 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBC1P01850 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBC1P01850 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBC1P01850 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBC1P01850 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBC1P01850 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRBC1P01850 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBC1P01850 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBC1P01850 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBC1P01850 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBC1P01850 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBC1P01850 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBC1P01850 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.28■□□□□ 0.68
TRBC1P01850 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.28■□□□□ 0.68
TRBC1P01850 AL355075.4-201ENST00000554988 638 ntBASIC19.28■□□□□ 0.68
TRBC1P01850 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBC1P01850 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBC1P01850 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBC1P01850 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBC1P01850 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBC1P01850 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBC1P01850 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBC1P01850 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRBC1P01850 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBC1P01850 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBC1P01850 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
TRBC1P01850 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.27■□□□□ 0.68
TRBC1P01850 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TRBC1P01850 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.27■□□□□ 0.68
TRBC1P01850 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBC1P01850 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.27■□□□□ 0.68
TRBC1P01850 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBC1P01850 DGCR10-201ENST00000609839 495 ntBASIC19.27■□□□□ 0.68
TRBC1P01850 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRBC1P01850 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBC1P01850 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRBC1P01850 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TRBC1P01850 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TRBC1P01850 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.27■□□□□ 0.67
TRBC1P01850 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBC1P01850 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBC1P01850 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.27■□□□□ 0.67
TRBC1P01850 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBC1P01850 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBC1P01850 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.27■□□□□ 0.67
TRBC1P01850 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRBC1P01850 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBC1P01850 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRBC1P01850 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.26■□□□□ 0.67
TRBC1P01850 FAM207BP-201ENST00000447172 505 ntBASIC19.26■□□□□ 0.67
TRBC1P01850 RBM17P1-201ENST00000453646 1190 ntBASIC19.26■□□□□ 0.67
TRBC1P01850 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
TRBC1P01850 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.26■□□□□ 0.67
TRBC1P01850 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBC1P01850 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBC1P01850 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRBC1P01850 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBC1P01850 AL032819.2-201ENST00000624543 2162 ntBASIC19.26■□□□□ 0.67
TRBC1P01850 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBC1P01850 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBC1P01850 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBC1P01850 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBC1P01850 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBC1P01850 AC116562.4-201ENST00000641316 2276 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms