Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN1O95832 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.16■□□□□ 0.34
CLDN1O95832 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN1O95832 AL512604.3-201ENST00000569583 964 ntBASIC17.16■□□□□ 0.34
CLDN1O95832 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN1O95832 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN1O95832 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN1O95832 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN1O95832 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN1O95832 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLDN1O95832 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN1O95832 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN1O95832 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN1O95832 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN1O95832 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN1O95832 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN1O95832 TSPY17P-201ENST00000450329 467 ntBASIC17.15■□□□□ 0.34
CLDN1O95832 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN1O95832 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
CLDN1O95832 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 AC083849.1-201ENST00000615227 514 ntBASIC17.15■□□□□ 0.34
CLDN1O95832 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN1O95832 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN1O95832 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN1O95832 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLDN1O95832 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN1O95832 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN1O95832 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN1O95832 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
CLDN1O95832 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 KRT8P10-201ENST00000450021 1447 ntBASIC17.14■□□□□ 0.33
CLDN1O95832 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN1O95832 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLDN1O95832 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN1O95832 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLDN1O95832 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN1O95832 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.14■□□□□ 0.33
CLDN1O95832 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 TUBB8P6-201ENST00000436895 1288 ntBASIC17.14■□□□□ 0.33
CLDN1O95832 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN1O95832 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN1O95832 AC112907.2-201ENST00000448639 330 ntBASIC17.14■□□□□ 0.33
CLDN1O95832 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN1O95832 ZNF444P1-201ENST00000559497 298 ntBASIC17.14■□□□□ 0.33
CLDN1O95832 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN1O95832 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN1O95832 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN1O95832 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN1O95832 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN1O95832 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN1O95832 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN1O95832 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms