Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NDUFS3O75489 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.18■□□□□ 0.66
NDUFS3O75489 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
NDUFS3O75489 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NDUFS3O75489 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NDUFS3O75489 TEX21P-204ENST00000641479 1693 ntBASIC19.17■□□□□ 0.66
NDUFS3O75489 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 BX323043.1-201ENST00000641006 1765 ntBASIC19.17■□□□□ 0.66
NDUFS3O75489 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.17■□□□□ 0.66
NDUFS3O75489 AC141586.3-201ENST00000562166 1838 ntBASIC19.17■□□□□ 0.66
NDUFS3O75489 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 AC133681.1-201ENST00000465482 601 ntBASIC19.17■□□□□ 0.66
NDUFS3O75489 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.17■□□□□ 0.66
NDUFS3O75489 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NDUFS3O75489 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.17■□□□□ 0.66
NDUFS3O75489 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
NDUFS3O75489 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS3O75489 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.17■□□□□ 0.66
NDUFS3O75489 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFS3O75489 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NDUFS3O75489 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.16■□□□□ 0.66
NDUFS3O75489 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.16■□□□□ 0.66
NDUFS3O75489 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFS3O75489 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.16■□□□□ 0.66
NDUFS3O75489 AP000974.1-201ENST00000623909 2387 ntBASIC19.16■□□□□ 0.66
NDUFS3O75489 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFS3O75489 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS3O75489 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFS3O75489 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.15■□□□□ 0.66
NDUFS3O75489 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.15■□□□□ 0.66
NDUFS3O75489 C1QBPP2-201ENST00000528754 825 ntBASIC19.15■□□□□ 0.66
NDUFS3O75489 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NDUFS3O75489 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.15■□□□□ 0.66
NDUFS3O75489 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 LINC01465-201ENST00000408887 1940 ntBASIC19.15■□□□□ 0.66
NDUFS3O75489 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.15■□□□□ 0.66
NDUFS3O75489 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.15■□□□□ 0.66
NDUFS3O75489 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NDUFS3O75489 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS3O75489 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NDUFS3O75489 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NDUFS3O75489 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NDUFS3O75489 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
NDUFS3O75489 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
NDUFS3O75489 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
NDUFS3O75489 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDUFS3O75489 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NDUFS3O75489 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDUFS3O75489 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDUFS3O75489 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.14■□□□□ 0.65
NDUFS3O75489 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDUFS3O75489 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.14■□□□□ 0.65
NDUFS3O75489 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.14■□□□□ 0.65
NDUFS3O75489 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NDUFS3O75489 TSPY20P-201ENST00000450910 630 ntBASIC19.14■□□□□ 0.65
NDUFS3O75489 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.14■□□□□ 0.65
NDUFS3O75489 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.14■□□□□ 0.65
NDUFS3O75489 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms