Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SYNCRIPO60506 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNCRIPO60506 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.64■□□□□ 0.74
SYNCRIPO60506 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.64■□□□□ 0.74
SYNCRIPO60506 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.64■□□□□ 0.74
SYNCRIPO60506 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNCRIPO60506 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.64■□□□□ 0.74
SYNCRIPO60506 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 MFAP1P1-201ENST00000442257 1255 ntBASIC19.64■□□□□ 0.73
SYNCRIPO60506 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNCRIPO60506 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNCRIPO60506 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SYNCRIPO60506 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SYNCRIPO60506 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNCRIPO60506 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.63■□□□□ 0.73
SYNCRIPO60506 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNCRIPO60506 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.63■□□□□ 0.73
SYNCRIPO60506 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SYNCRIPO60506 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SYNCRIPO60506 AC008040.2-201ENST00000461049 708 ntBASIC19.63■□□□□ 0.73
SYNCRIPO60506 AL160286.2-201ENST00000567150 934 ntBASIC19.63■□□□□ 0.73
SYNCRIPO60506 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SYNCRIPO60506 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 AC073508.3-201ENST00000619697 1419 ntBASIC19.62■□□□□ 0.73
SYNCRIPO60506 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 CCR12P-201ENST00000446203 998 ntBASIC19.62■□□□□ 0.73
SYNCRIPO60506 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 AC091390.4-202ENST00000476426 537 ntBASIC19.62■□□□□ 0.73
SYNCRIPO60506 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 AC116562.4-202ENST00000641738 218 ntBASIC19.62■□□□□ 0.73
SYNCRIPO60506 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNCRIPO60506 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNCRIPO60506 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 AC010203.1-204ENST00000548782 407 ntBASIC19.61■□□□□ 0.73
SYNCRIPO60506 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNCRIPO60506 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNCRIPO60506 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms