Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP9BO43861 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATP9BO43861 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATP9BO43861 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.91■□□□□ 0.78
ATP9BO43861 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP9BO43861 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATP9BO43861 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP9BO43861 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 AC093484.2-201ENST00000580996 2166 ntBASIC19.9■□□□□ 0.78
ATP9BO43861 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP9BO43861 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.9■□□□□ 0.78
ATP9BO43861 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.9■□□□□ 0.78
ATP9BO43861 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 AC120498.9-201ENST00000339021 3867 ntBASIC19.9■□□□□ 0.78
ATP9BO43861 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP9BO43861 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP9BO43861 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ATP9BO43861 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP9BO43861 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
ATP9BO43861 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP9BO43861 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ATP9BO43861 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
ATP9BO43861 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATP9BO43861 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATP9BO43861 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP9BO43861 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP9BO43861 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP9BO43861 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP9BO43861 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP9BO43861 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
ATP9BO43861 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP9BO43861 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ATP9BO43861 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP9BO43861 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
ATP9BO43861 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
ATP9BO43861 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATP9BO43861 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP9BO43861 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATP9BO43861 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 AL355355.2-201ENST00000442321 338 ntBASIC19.88■□□□□ 0.77
ATP9BO43861 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.88■□□□□ 0.77
ATP9BO43861 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP9BO43861 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.88■□□□□ 0.77
ATP9BO43861 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP9BO43861 AP003071.4-201ENST00000562276 1284 ntBASIC19.88■□□□□ 0.77
ATP9BO43861 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.88■□□□□ 0.77
ATP9BO43861 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP9BO43861 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATP9BO43861 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP9BO43861 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATP9BO43861 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP9BO43861 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP9BO43861 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP9BO43861 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP9BO43861 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP9BO43861 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP9BO43861 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP9BO43861 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATP9BO43861 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP9BO43861 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP9BO43861 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP9BO43861 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms