Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 AC098818.2-201ENST00000564925 2320 ntBASIC19.43■□□□□ 0.7
HTRA2O43464 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.43■□□□□ 0.7
HTRA2O43464 Z82202.1-201ENST00000623446 1880 ntBASIC19.43■□□□□ 0.7
HTRA2O43464 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HTRA2O43464 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.43■□□□□ 0.7
HTRA2O43464 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.42■□□□□ 0.7
HTRA2O43464 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.42■□□□□ 0.7
HTRA2O43464 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.42■□□□□ 0.7
HTRA2O43464 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.42■□□□□ 0.7
HTRA2O43464 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.42■□□□□ 0.7
HTRA2O43464 AC130371.2-201ENST00000619443 611 ntBASIC19.42■□□□□ 0.7
HTRA2O43464 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA2O43464 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA2O43464 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA2O43464 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HTRA2O43464 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA2O43464 SDHAP1-207ENST00000440850 2000 ntBASIC19.41■□□□□ 0.7
HTRA2O43464 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA2O43464 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HTRA2O43464 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 AC004951.3-201ENST00000418645 1148 ntBASIC19.41■□□□□ 0.7
HTRA2O43464 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.41■□□□□ 0.7
HTRA2O43464 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.41■□□□□ 0.7
HTRA2O43464 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.41■□□□□ 0.7
HTRA2O43464 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HTRA2O43464 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HTRA2O43464 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
HTRA2O43464 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HTRA2O43464 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HTRA2O43464 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.4■□□□□ 0.7
HTRA2O43464 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.4■□□□□ 0.7
HTRA2O43464 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.4■□□□□ 0.7
HTRA2O43464 AC008040.2-201ENST00000461049 708 ntBASIC19.4■□□□□ 0.7
HTRA2O43464 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.4■□□□□ 0.7
HTRA2O43464 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.4■□□□□ 0.7
HTRA2O43464 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.4■□□□□ 0.7
HTRA2O43464 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.4■□□□□ 0.7
HTRA2O43464 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HTRA2O43464 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
HTRA2O43464 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HTRA2O43464 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HTRA2O43464 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
HTRA2O43464 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTRA2O43464 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTRA2O43464 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HTRA2O43464 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HTRA2O43464 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTRA2O43464 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HTRA2O43464 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HTRA2O43464 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HTRA2O43464 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 AC091390.4-202ENST00000476426 537 ntBASIC19.39■□□□□ 0.69
HTRA2O43464 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
HTRA2O43464 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.39■□□□□ 0.69
HTRA2O43464 AL355075.4-201ENST00000554988 638 ntBASIC19.39■□□□□ 0.69
HTRA2O43464 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HTRA2O43464 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.39■□□□□ 0.69
HTRA2O43464 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTRA2O43464 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms